Top cofit genes for mRNA_4889 from Rhodosporidium toruloides IFO0880

mRNA_4889 13257 : HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5442 13810 HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708 no 0.86
2 mRNA_4387 12755 HMMPfam-Ctf8-PF09696 no 0.84
3 mRNA_1300 9668 BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy... no 0.81
4 mRNA_5258 13626 KOG0538 Glycolate oxidase no 0.81
5 mRNA_3423 11791 KOG3655 Drebrins and related actin binding proteins no 0.81
6 mRNA_3040 11408 K17275 PLS1 plastin-1 no 0.80
7 mRNA_7147 15515 Hypothetical Protein no 0.80
8 mRNA_5623 13991 KOG3393 Predicted membrane protein no 0.79
9 mRNA_2778 11146 K15264 NSUN5, WBSCR20 putative methyltransferase no 0.79
10 mRNA_5169 13537 Hypothetical Protein no 0.79
11 mRNA_2646 11014 HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52058 no 0.79
12 mRNA_5294 13662 K02830 HRAD1, RAD17 cell cycle checkpoint protein no 0.79
13 mRNA_8135 16503 K00804 GGPS1 geranylgeranyl diphosphate synthase, type III no 0.79
14 mRNA_3632 12000 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 no 0.78
15 mRNA_225 8593 KOG0619 FOG Leucine rich repeat no 0.78
16 mRNA_3361 11729 K11247 SH3GL endophilin-A no 0.76
17 mRNA_5688 14056 K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1 no 0.76
18 mRNA_733 9101 K13954 yiaY alcohol dehydrogenase no 0.76
19 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.76
20 mRNA_6196 14564 Hypothetical Protein no 0.76