Top cofit genes for mRNA_4877 from Rhodosporidium toruloides IFO0880

mRNA_4877 13245 : KOG2533 Permease of the major facilitator superfamily

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3841 12209 K13431 SRPR signal recognition particle receptor subunit alpha no 0.80
2 mRNA_6376 14744 K14811 DBP3 ATP-dependent RNA helicase DBP3 no 0.79
3 mRNA_6311 14679 K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7 no 0.79
4 mRNA_6177 14545 K00868 pdxK, pdxY pyridoxine kinase no 0.78
5 mRNA_3087 11455 HMMPfam-haloacid dehalogenase-like hydrolase-PF12710,SUPERFAMILY--SSF56784,TIGRFAM-HAD-SF-IB HAD phosphoserine phosphatase-like hydrolase, family IB-TIGR01488,TIGRFAM-DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase-TIGR01489 no 0.78
6 mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.77
7 mRNA_3006 11374 K03259 EIF4E translation initiation factor 4E no 0.77
8 mRNA_6064 14432 Hypothetical Protein no 0.77
9 mRNA_7701 16069 SMART-Armadillo/beta-catenin-like repeats-SM00185,SUPERFAMILY--SSF48371 no 0.77
10 mRNA_3649 12017 HMMPfam-Protein of unknown function, DUF604-PF04646 no 0.77
11 mRNA_8071 16439 Hypothetical Protein no 0.77
12 mRNA_110 8478 KOG3399 Predicted Yippee-type zinc-binding protein no 0.76
13 mRNA_5774 14142 K11982 RNF115_126 E3 ubiquitin-protein ligase RNF115/126 no 0.75
14 mRNA_5599 13967 HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296 no 0.75
15 mRNA_581 8949 Interpro ERCC4 domain 0 no 0.74
16 mRNA_1392 9760 HMMPfam-DASH complex subunit Dam1-PF08653 no 0.74
17 mRNA_4889 13257 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.74
18 mRNA_2818 11186 K02178 BUB1 checkpoint serine/threonine-protein kinase no 0.74
19 mRNA_5600 13968 BLAST polysaccharide lyase family 14 protein [Sistotremastr... no 0.74
20 mRNA_4365 12733 HMMPfam-Zinc finger, C3HC4 type (RING finger)-PF13920 no 0.73