Top cofit genes for mRNA_4849 from Rhodosporidium toruloides IFO0880

mRNA_4849 13217 : HMMPfam-FAD binding domain-PF01565,HMMPfam-Berberine and berberine like-PF08031,ProSitePatterns-Oxygen oxidoreductases covalent FAD-binding site.-PS00862,ProSiteProfiles-PCMH-type FAD-binding domain profile.-PS51387,SUPERFAMILY--SSF56176

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5060 13428 HMMPfam-Glycosyl transferase family 2-PF00535,HMMPfam-Glycosyl transferase family 8-PF01501,HMMPfam-Glycosyl transferase 4-like domain-PF13579,SUPERFAMILY--SSF53448,SUPERFAMILY--SSF53756 no 0.80
2 mRNA_1179 9547 K12611 DCP1B mRNA-decapping enzyme 1B no 0.80
3 mRNA_8232 16600 K12623 LSM4 U6 snRNA-associated Sm-like protein LSm4 no 0.76
4 mRNA_5141 13509 K12198 CHMP5, VPS60 charged multivesicular body protein 5 no 0.75
5 mRNA_5873 14241 K00761 upp, UPRT uracil phosphoribosyltransferase no 0.75
6 mRNA_4007 12375 K12373 HEXA_B hexosaminidase no 0.75
7 mRNA_671 9039 K03846 ALG9 alpha-1,2-mannosyltransferase no 0.74
8 mRNA_5510 13878 ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850 no 0.74
9 mRNA_559 8927 KOG4672 Uncharacterized conserved low complexity protein no 0.74
10 mRNA_1243 9611 K02493 hemK, prmC, HEMK release factor glutamine methyltransferase no 0.74
11 mRNA_7503 15871 Hypothetical Protein no 0.74
12 mRNA_7500 15868 KOG2062 26S proteasome regulatory complex, subunit RPN2/PSMD1 no 0.73
13 mRNA_8023 16391 HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978 no 0.73
14 mRNA_4962 13330 Hypothetical Protein no 0.73
15 mRNA_5066 13434 KOG3170 Conserved phosducin-like protein no 0.73
16 mRNA_6696 15064 KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases no 0.72
17 mRNA_1415 9783 Hypothetical Protein no 0.72
18 mRNA_7457 15825 Hypothetical Protein no 0.72
19 mRNA_3942 12310 K20298 VPS52 vacuolar protein sorting-associated protein 52 no 0.72
20 mRNA_7236 15604 Hypothetical Protein no 0.72