Top cofit genes for mRNA_4715 from Rhodosporidium toruloides IFO0880

mRNA_4715 13083 : KOG1730 Thioredoxin-like protein

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7943 16311 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.79
2 mRNA_8103 16471 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.77
3 mRNA_1340 9708 KOG3968 Atrazine chlorohydrolase/guanine deaminase no 0.76
4 mRNA_5097 13465 Hypothetical Protein no 0.74
5 mRNA_3432 11800 BLAST RecF/RecN/SMC protein [Sistotremastrum niveocremeum H... no 0.73
6 mRNA_6484 14852 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.71
7 mRNA_172 8540 K14264 BNA3 kynurenine aminotransferase no 0.70
8 mRNA_398 8766 KOG1305 Amino acid transporter protein no 0.69
9 mRNA_4657 13025 Hypothetical Protein no 0.69
10 mRNA_8433 16801 SUPERFAMILY--SSF54909 no 0.69
11 mRNA_7408 15776 K18422 MOV10 helicase MOV-10 no 0.69
12 mRNA_7988 16356 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 no 0.69
13 mRNA_4629 12997 K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14 no 0.69
14 mRNA_389 8757 HMMPfam-Vacuolar sorting protein 9 (VPS9) domain-PF02204,ProSiteProfiles-VPS9 domain profile.-PS51205,SUPERFAMILY--SSF109993 no 0.68
15 mRNA_7326 15694 K01969 E6.4.1.4B 3-methylcrotonyl-CoA carboxylase beta subunit no 0.68
16 mRNA_6943 15311 SUPERFAMILY--SSF52047 no 0.68
17 mRNA_6275 14643 BLAST secreted protein [Melampsora larici-populina 98AG31] no 0.68
18 mRNA_2424 10792 KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) no 0.67
19 mRNA_7743 16111 K09569 FKBP2 FK506-binding protein 2 no 0.66
20 mRNA_5971 14339 Hypothetical Protein no 0.66