Top cofit genes for mRNA_4629 from Rhodosporidium toruloides IFO0880

mRNA_4629 12997 : K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1144 9512 K13355 NUDT19 nucleoside diphosphate-linked moiety X motif 19, mitochondrial no 0.86
2 mRNA_3389 11757 K00521 E1.16.1.7 ferric-chelate reductase no 0.84
3 mRNA_3312 11680 Hypothetical Protein no 0.84
4 mRNA_3053 11421 K06889 K06889 uncharacterized protein no 0.84
5 mRNA_5835 14203 Hypothetical Protein no 0.81
6 mRNA_597 8965 ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616 no 0.80
7 mRNA_8226 16594 KOG0849 Transcription factor PRD and related proteins, contain PAX and HOX domains no 0.80
8 mRNA_398 8766 KOG1305 Amino acid transporter protein no 0.80
9 mRNA_6498 14866 K00226 pyrD dihydroorotate dehydrogenase (fumarate) no 0.80
10 mRNA_5327 13695 Hypothetical Protein no 0.79
11 mRNA_3003 11371 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 no 0.78
12 mRNA_6484 14852 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.78
13 mRNA_7943 16311 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.78
14 mRNA_5213 13581 Hypothetical Protein no 0.77
15 mRNA_6943 15311 SUPERFAMILY--SSF52047 no 0.77
16 mRNA_4630 12998 Hypothetical Protein no 0.77
17 mRNA_4657 13025 Hypothetical Protein no 0.77
18 mRNA_1402 9770 K06654 PHO80 phosphate system cyclin PHO80 no 0.77
19 mRNA_1870 10238 K18043 OCA1 tyrosine-protein phosphatase OCA1 no 0.76
20 mRNA_8339 16707 K06180 rluD 23S rRNA pseudouridine1911/1915/1917 synthase no 0.76