Top cofit genes for mRNA_4608 from Rhodosporidium toruloides IFO0880

mRNA_4608 12976 : KOG0254 Predicted transporter (major facilitator superfamily)

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6311 14679 K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7 no 0.79
2 mRNA_6177 14545 K00868 pdxK, pdxY pyridoxine kinase no 0.78
3 mRNA_5944 14312 Hypothetical Protein no 0.78
4 mRNA_4166 12534 K12597 AIR1_2 protein AIR1/2 no 0.77
5 mRNA_8127 16495 BLAST CigA protein-like protein [Phycomyces blakesleean... no 0.77
6 mRNA_2650 11018 BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa] no 0.74
7 mRNA_3660 12028 HMMPfam-ATPase family associated with various cellular activities (AAA)-PF00004,SUPERFAMILY--SSF52540 no 0.74
8 mRNA_4889 13257 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.73
9 mRNA_5746 14114 Hypothetical Protein no 0.73
10 mRNA_4567 12935 K10743 RNASEH2A ribonuclease H2 subunit A no 0.72
11 mRNA_2778 11146 K15264 NSUN5, WBSCR20 putative methyltransferase no 0.72
12 mRNA_4877 13245 KOG2533 Permease of the major facilitator superfamily no 0.71
13 mRNA_6376 14744 K14811 DBP3 ATP-dependent RNA helicase DBP3 no 0.71
14 mRNA_5462 13830 HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321 no 0.71
15 mRNA_3619 11987 HMMPfam-X-Pro dipeptidyl-peptidase (S15 family)-PF02129,HMMPfam-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-PF08530,SMART-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-SM00939,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF53474,TIGRFAM-/NonD hydrolase CocE/NonD family protein-TIGR00976 no 0.71
16 mRNA_7020 15388 K11446 KDM5, JARID1 histone demethylase JARID1 no 0.70
17 mRNA_3361 11729 K11247 SH3GL endophilin-A no 0.70
18 mRNA_4041 12409 HMMPfam-Sds3-like-PF08598 no 0.70
19 mRNA_1379 9747 HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236 no 0.70
20 mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.70