Top cofit genes for mRNA_4566 from Rhodosporidium toruloides IFO0880

mRNA_4566 12934 : KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5898 14266 Hypothetical Protein no 0.87
2 mRNA_6639 15007 K00362 nirB nitrite reductase (NADH) large subunit no 0.82
3 mRNA_4624 12992 Hypothetical Protein no 0.81
4 mRNA_1167 9535 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.81
5 mRNA_122 8490 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685 no 0.80
6 mRNA_3140 11508 BLAST peptide release factor [Melanopsichium pennsylvanicum 4] no 0.79
7 mRNA_6239 14607 K01372 BLMH, pepC bleomycin hydrolase no 0.79
8 mRNA_6144 14512 KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors no 0.79
9 mRNA_8346 16714 Hypothetical Protein no 0.79
10 mRNA_2375 10743 Hypothetical Protein no 0.78
11 mRNA_6626 14994 Hypothetical Protein no 0.77
12 mRNA_4940 13308 K06693 PSMD9 26S proteasome non-ATPase regulatory subunit 9 no 0.77
13 mRNA_2334 10702 K17815 EXO5 exonuclease V no 0.77
14 mRNA_783 9151 HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481 no 0.77
15 mRNA_4492 12860 KOG1198 Zinc-binding oxidoreductase no 0.77
16 mRNA_3988 12356 Hypothetical Protein no 0.77
17 mRNA_6224 14592 Hypothetical Protein no 0.77
18 mRNA_177 8545 KOG4096 Uncharacterized conserved protein no 0.76
19 mRNA_6979 15347 KOG2789 Putative Zn-finger protein no 0.76
20 mRNA_4723 13091 Hypothetical Protein no 0.76