Top cofit genes for mRNA_4536 from Rhodosporidium toruloides IFO0880

mRNA_4536 12904 : HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_8027 16395 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 no 0.71
2 mRNA_4324 12692 K18754 LIN28 protein lin-28 no 0.71
3 mRNA_6719 15087 Hypothetical Protein no 0.66
4 mRNA_6809 15177 HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52047,SUPERFAMILY--SSF81383 no 0.66
5 mRNA_8381 16749 Hypothetical Protein no 0.65
6 mRNA_3103 11471 ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383 no 0.64
7 mRNA_1960 10328 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) no 0.63
8 mRNA_3983 12351 HMMPfam-Mpv17 / PMP22 family-PF04117 no 0.61
9 mRNA_1043 9411 K16732 PRC1 protein regulator of cytokinesis 1 no 0.61
10 mRNA_1229 9597 SUPERFAMILY--SSF52047 no 0.60
11 mRNA_3853 12221 K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other no 0.59
12 mRNA_5003 13371 Hypothetical Protein no 0.59
13 mRNA_734 9102 K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12 no 0.59
14 mRNA_373 8741 KOG2542 Uncharacterized conserved protein (YdiU family) no 0.59
15 mRNA_929 9297 HMMPfam-Protein of unknown function (DUF2419)-PF10343 no 0.58
16 mRNA_3342 11710 PRINTS-Proline rich extensin signature-PR01217 no 0.58
17 mRNA_5293 13661 Hypothetical Protein no 0.58
18 mRNA_4793 13161 HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113 no 0.57
19 mRNA_847 9215 HMMPfam-Amino acid permease-PF13520 no 0.57
20 mRNA_644 9012 KOG3020 TatD-related DNase no 0.57