Top cofit genes for mRNA_4527 from Rhodosporidium toruloides IFO0880

mRNA_4527 12895 : SUPERFAMILY--SSF50129,SUPERFAMILY--SSF51735

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1843 10211 Hypothetical Protein no 0.87
2 mRNA_4562 12930 K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51 no 0.82
3 mRNA_5438 13806 K06867 K06867 uncharacterized protein no 0.81
4 mRNA_4732 13100 HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338 no 0.81
5 mRNA_5356 13724 K07748 E1.1.1.170, NSDHL, ERG26 sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) no 0.81
6 mRNA_6815 15183 HMMPfam-PUB domain-PF09409,SUPERFAMILY--SSF143503 no 0.79
7 mRNA_5162 13530 Hypothetical Protein no 0.79
8 mRNA_5783 14151 KOG4623 Uncharacterized conserved protein no 0.78
9 mRNA_5247 13615 HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 no 0.77
10 mRNA_3077 11445 K07542 PIGV phosphatidylinositol glycan, class V no 0.76
11 mRNA_3338 11706 KOG3525 Subtilisin-like proprotein convertase no 0.76
12 mRNA_7891 16259 Hypothetical Protein no 0.76
13 mRNA_1746 10114 KOG2897 DNA-binding protein YL1 and related proteins no 0.76
14 mRNA_5274 13642 KOG0032 Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily no 0.75
15 mRNA_3903 12271 K01273 DPEP membrane dipeptidase no 0.75
16 mRNA_284 8652 K01762 ACS 1-aminocyclopropane-1-carboxylate synthase no 0.74
17 mRNA_1636 10004 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.74
18 mRNA_8142 16510 K06910 K06910 uncharacterized protein no 0.73
19 mRNA_3407 11775 KOG0498 K+-channel ERG and related proteins, contain PAS/PAC sensor domain no 0.73
20 mRNA_6500 14868 K14416 HBS1 elongation factor 1 alpha-like protein no 0.72