Top cofit genes for mRNA_4490 from Rhodosporidium toruloides IFO0880

mRNA_4490 12858 : KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5586 13954 HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874 no 0.78
2 mRNA_6898 15266 HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,SUPERFAMILY--SSF52833 no 0.74
3 mRNA_3958 12326 Hypothetical Protein no 0.72
4 mRNA_3768 12136 HMMPfam-Protein of unknown function (DUF1275)-PF06912 no 0.71
5 mRNA_1650 10018 KOG0254 Predicted transporter (major facilitator superfamily) no 0.70
6 mRNA_4663 13031 K18619 CORO7 coronin-7 no 0.69
7 mRNA_6613 14981 K08740 MSH4 DNA mismatch repair protein MSH4 no 0.68
8 mRNA_5383 13751 Hypothetical Protein no 0.68
9 mRNA_7261 15629 SUPERFAMILY--SSF51735 no 0.68
10 mRNA_4215 12583 HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350 no 0.67
11 mRNA_7307 15675 Hypothetical Protein no 0.66
12 mRNA_2212 10580 K04441 P38 p38 MAP kinase no 0.66
13 mRNA_2162 10530 K15027 EIF2D translation initiation factor 2D no 0.66
14 mRNA_1943 10311 Hypothetical Protein no 0.66
15 mRNA_1633 10001 HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473 no 0.66
16 mRNA_2254 10622 K17822 DCUN1D1_2 DCN1-like protein 1/2 no 0.66
17 mRNA_3623 11991 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.65
18 mRNA_6203 14571 HMMPfam-HbrB-like-PF08539 no 0.65
19 mRNA_2730 11098 Hypothetical Protein no 0.65
20 mRNA_2338 10706 K05545 DUS4 tRNA-dihydrouridine synthase 4 no 0.65