Top cofit genes for mRNA_4208 from Rhodosporidium toruloides IFO0880

mRNA_4208 12576 : K17919 SNX4 sorting nexin-4

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5555 13923 K19984 EXOC5, SEC10 exocyst complex component 5 no 0.77
2 mRNA_8188 16556 K05012 CLCN3_4_5 chloride channel 3/4/5 no 0.76
3 mRNA_3619 11987 HMMPfam-X-Pro dipeptidyl-peptidase (S15 family)-PF02129,HMMPfam-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-PF08530,SMART-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-SM00939,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF53474,TIGRFAM-/NonD hydrolase CocE/NonD family protein-TIGR00976 no 0.75
4 mRNA_8434 16802 SUPERFAMILY--SSF55729 no 0.75
5 mRNA_3226 11594 K05535 MNN2 alpha 1,2-mannosyltransferase no 0.71
6 mRNA_4889 13257 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.71
7 mRNA_1758 10126 KOG2998 Uncharacterized conserved protein no 0.70
8 mRNA_8076 16444 Hypothetical Protein no 0.70
9 mRNA_3538 11906 BLAST TPR-like protein [Sanghuangporus baumii] no 0.70
10 mRNA_1218 9586 SUPERFAMILY--SSF52047 no 0.70
11 mRNA_7411 15779 K02537 MAD2 mitotic spindle assembly checkpoint protein MAD2 no 0.70
12 mRNA_4151 12519 ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.69
13 mRNA_3205 11573 K13281 uvsE, UVE1 UV DNA damage endonuclease no 0.68
14 mRNA_5164 13532 HMMPfam-Beta-lactamase superfamily domain-PF12706,SMART-Metallo-beta-lactamase superfamily-SM00849,SUPERFAMILY--SSF56281 no 0.68
15 mRNA_6690 15058 KOG4776 Uncharacterized conserved protein BCNT no 0.67
16 mRNA_5623 13991 KOG3393 Predicted membrane protein no 0.66
17 mRNA_6380 14748 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383 no 0.66
18 mRNA_163 8531 Hypothetical Protein no 0.66
19 mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.66
20 mRNA_2804 11172 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 no 0.66