Top cofit genes for mRNA_4064 from Rhodosporidium toruloides IFO0880

mRNA_4064 12432 : HMMPfam-Rdx family-PF10262,SUPERFAMILY--SSF52833

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_7159 15527 HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.76
2 mRNA_5646 14014 K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase no 0.75
3 mRNA_5011 13379 BLAST transmembrane protein, putative [Rhizoctonia solani A... no 0.74
4 mRNA_6256 14624 Hypothetical Protein no 0.73
5 mRNA_503 8871 Hypothetical Protein no 0.73
6 mRNA_1593 9961 KOG4366 Predicted thioesterase no 0.72
7 mRNA_7137 15505 KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein) no 0.72
8 mRNA_1973 10341 KOG1057 Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton no 0.72
9 mRNA_1826 10194 Hypothetical Protein no 0.72
10 mRNA_1797 10165 KOG2641 Predicted seven transmembrane receptor - rhodopsin family no 0.72
11 mRNA_1717 10085 HMMPfam-Per1-like-PF04080 no 0.71
12 mRNA_8338 16706 Hypothetical Protein no 0.71
13 mRNA_1150 9518 Hypothetical Protein no 0.70
14 mRNA_5031 13399 HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785 no 0.70
15 mRNA_6868 15236 Hypothetical Protein no 0.70
16 mRNA_4689 13057 Hypothetical Protein no 0.69
17 mRNA_2473 10841 K01610 E4.1.1.49, pckA phosphoenolpyruvate carboxykinase (ATP) no 0.69
18 mRNA_7416 15784 Hypothetical Protein no 0.69
19 mRNA_7025 15393 K13122 FRG1 protein FRG1 no 0.69
20 mRNA_4203 12571 K19842 ROM1_2 RHO1 GDP-GTP exchange protein 1/2 no 0.69