Top cofit genes for mRNA_4063 from Rhodosporidium toruloides IFO0880

mRNA_4063 12431 : K10777 LIG4, DNL4 DNA ligase 4

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6484 14852 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.87
2 mRNA_7280 15648 Hypothetical Protein no 0.83
3 mRNA_3596 11964 HMMPfam-Phytanoyl-CoA dioxygenase (PhyH)-PF05721,SUPERFAMILY--SSF51197 no 0.81
4 mRNA_7852 16220 Hypothetical Protein no 0.81
5 mRNA_1709 10077 K16302 CNNM metal transporter CNNM no 0.80
6 mRNA_824 9192 Hypothetical Protein no 0.78
7 mRNA_4734 13102 Hypothetical Protein no 0.78
8 mRNA_2972 11340 K03850 ALG10 alpha-1,2-glucosyltransferase no 0.78
9 mRNA_691 9059 BLAST gliotoxin biosynthesis protein GliK [Marssonina b... no 0.78
10 mRNA_7356 15724 HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 no 0.78
11 mRNA_2179 10547 K06681 LTE1 Gdp/GTP exchange factor required for growth at low temperatures no 0.77
12 mRNA_3025 11393 K11354 cph1 two-component system, chemotaxis family, sensor kinase Cph1 no 0.75
13 mRNA_7858 16226 K11673 ACTR8, ARP8, INO80N actin-related protein 8 no 0.75
14 mRNA_2093 10461 K10967 KTR1_3 alpha 1,2-mannosyltransferase no 0.75
15 mRNA_3588 11956 KOG0254 Predicted transporter (major facilitator superfamily) no 0.75
16 mRNA_2556 10924 Hypothetical Protein no 0.74
17 mRNA_4747 13115 SUPERFAMILY--SSF52047 no 0.74
18 mRNA_5837 14205 Hypothetical Protein no 0.74
19 mRNA_5141 13509 K12198 CHMP5, VPS60 charged multivesicular body protein 5 no 0.74
20 mRNA_251 8619 HMMPfam-ACT domain-PF13840,PIRSF--PIRSF008459,SUPERFAMILY--SSF55021 no 0.73