Top cofit genes for mRNA_4011 from Rhodosporidium toruloides IFO0880

mRNA_4011 12379 : HMMPfam-Retinoic acid induced 16-like protein-PF10257

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3772 12140 K17662 CBP3, UQCC cytochrome b pre-mRNA-processing protein 3 no 0.85
2 mRNA_4202 12570 K00249 ACADM, acd acyl-CoA dehydrogenase no 0.82
3 mRNA_3033 11401 BLAST related to transcription factor medusa [Melanopsichiu... no 0.79
4 mRNA_3796 12164 Hypothetical Protein no 0.77
5 mRNA_2570 10938 SUPERFAMILY--SSF52266 no 0.76
6 mRNA_5557 13925 K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 no 0.75
7 mRNA_7105 15473 KOG1890 Phosphoinositide phosphatase SAC1 no 0.75
8 mRNA_4530 12898 K00605 gcvT, AMT aminomethyltransferase no 0.75
9 mRNA_7908 16276 K03783 punA, PNP purine-nucleoside phosphorylase no 0.75
10 mRNA_993 9361 HMMPfam-Zinc finger, C2H2 type-PF00096,HMMPfam-C2H2-type zinc finger-PF13894,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SMART-zinc finger-SM00355,SUPERFAMILY--SSF57667 no 0.75
11 mRNA_4417 12785 Hypothetical Protein no 0.74
12 mRNA_2239 10607 K18163 NDUFAF6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6 no 0.74
13 mRNA_170 8538 K12179 COPS6, CSN6 COP9 signalosome complex subunit 6 no 0.74
14 mRNA_2888 11256 KOG1012 Ca2+-dependent lipid-binding protein CLB1/vesicle protein vp115/Granuphilin A, contains C2 domain no 0.74
15 mRNA_1825 10193 KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins no 0.74
16 mRNA_3170 11538 Hypothetical Protein no 0.74
17 mRNA_2365 10733 HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562 no 0.73
18 mRNA_6441 14809 K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit no 0.73
19 mRNA_4689 13057 Hypothetical Protein no 0.73
20 mRNA_333 8701 Hypothetical Protein no 0.73