Top cofit genes for mRNA_3900 from Rhodosporidium toruloides IFO0880

mRNA_3900 12268 : SUPERFAMILY--SSF55729

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6162 14530 K11427 DOT1L, DOT1 histone-lysine N-methyltransferase, H3 lysine-79 specific no 0.84
2 mRNA_4328 12696 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383 no 0.79
3 mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.79
4 mRNA_2879 11247 HMMPfam-Protein of unknown function (DUF3237)-PF11578 no 0.77
5 mRNA_5919 14287 KOG1836 Extracellular matrix glycoprotein Laminin subunits alpha and gamma no 0.77
6 mRNA_7778 16146 Hypothetical Protein no 0.76
7 mRNA_7912 16280 K11434 PRMT1 type I protein arginine methyltransferase no 0.76
8 mRNA_3814 12182 PRINTS-Proline rich extensin signature-PR01217 no 0.76
9 mRNA_5756 14124 HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689 no 0.75
10 mRNA_2459 10827 KOG2747 Histone acetyltransferase (MYST family) no 0.75
11 mRNA_4340 12708 K01074 PPT palmitoyl-protein thioesterase no 0.75
12 mRNA_3749 12117 HMMPfam-Nuclear pore complex assembly-PF13934,SUPERFAMILY--SSF57850 no 0.74
13 mRNA_8303 16671 KOG1398 Uncharacterized conserved protein no 0.73
14 mRNA_5241 13609 K01099 INPP5B_F inositol polyphosphate 5-phosphatase INPP5B/F no 0.73
15 mRNA_2449 10817 KOG1343 Histone deacetylase complex, catalytic component HDA1 no 0.73
16 mRNA_5954 14322 HMMPfam-Domain of unknown function (DUF2427)-PF10348,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665 no 0.73
17 mRNA_2889 11257 K08184 SLC16A7 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 7 no 0.72
18 mRNA_1393 9761 Hypothetical Protein no 0.72
19 mRNA_4727 13095 Hypothetical Protein no 0.72
20 mRNA_1596 9964 K14557 UTP6 U3 small nucleolar RNA-associated protein 6 no 0.71