Top cofit genes for mRNA_3896 from Rhodosporidium toruloides IFO0880

mRNA_3896 12264 : BLAST F-box domain containing protein [Metarhizium maju...

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2356 10724 Hypothetical Protein no 0.77
2 mRNA_6644 15012 HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744 no 0.74
3 mRNA_5456 13824 K07034 K07034 uncharacterized protein no 0.74
4 mRNA_4282 12650 Hypothetical Protein no 0.73
5 mRNA_2302 10670 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.72
6 mRNA_4422 12790 BLAST Regulator of nonsense transcripts UPF2 [Grifola frond... no 0.72
7 mRNA_7755 16123 Hypothetical Protein no 0.71
8 mRNA_3829 12197 KOG0519 Sensory transduction histidine kinase no 0.71
9 mRNA_5294 13662 K02830 HRAD1, RAD17 cell cycle checkpoint protein no 0.71
10 mRNA_2536 10904 K15601 KDM3 lysine-specific demethylase 3 no 0.71
11 mRNA_7147 15515 Hypothetical Protein no 0.71
12 mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 no 0.70
13 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.69
14 mRNA_3327 11695 HMMPfam-BAG domain-PF02179,SUPERFAMILY--SSF63491 no 0.69
15 mRNA_4043 12411 Hypothetical Protein no 0.69
16 mRNA_6649 15017 K12580 CNOT3, NOT3 CCR4-NOT transcription complex subunit 3 no 0.69
17 mRNA_199 8567 Hypothetical Protein no 0.69
18 mRNA_4387 12755 HMMPfam-Ctf8-PF09696 no 0.68
19 mRNA_3371 11739 K13806 DAGL sn1-specific diacylglycerol lipase no 0.68
20 mRNA_5954 14322 HMMPfam-Domain of unknown function (DUF2427)-PF10348,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665 no 0.66