Top cofit genes for mRNA_3884 from Rhodosporidium toruloides IFO0880

mRNA_3884 12252 : Hypothetical Protein

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5082 13450 K10696 BRE1 E3 ubiquitin-protein ligase BRE1 no 0.78
2 mRNA_3785 12153 K15178 RTF1 RNA polymerase-associated protein RTF1 no 0.77
3 mRNA_5846 14214 K04508 TBL1 transducin (beta)-like 1 no 0.75
4 mRNA_6955 15323 ProSiteProfiles-APSES-type HTH DNA-binding domain profile.-PS51299,SUPERFAMILY--SSF54616 no 0.75
5 mRNA_7679 16047 K12861 BCAS2 pre-mRNA-splicing factor SPF27 no 0.73
6 mRNA_7572 15940 Hypothetical Protein no 0.72
7 mRNA_3815 12183 K06631 PLK1 polo-like kinase 1 no 0.72
8 mRNA_4713 13081 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.72
9 mRNA_3504 11872 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.71
10 mRNA_4532 12900 K01247 alkA DNA-3-methyladenine glycosylase II no 0.71
11 mRNA_665 9033 K08853 AAK AP2-associated kinase no 0.70
12 mRNA_7597 15965 Hypothetical Protein no 0.70
13 mRNA_8481 16849 Hypothetical Protein no 0.70
14 mRNA_437 8805 Hypothetical Protein no 0.69
15 mRNA_454 8822 Hypothetical Protein no 0.69
16 mRNA_4662 13030 K20352 TMED10, ERV25 p24 family protein delta-1 no 0.69
17 mRNA_8078 16446 HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786 no 0.68
18 mRNA_6180 14548 KOG0218 Mismatch repair MSH3 no 0.68
19 mRNA_1261 9629 K04712 DEGS sphingolipid Delta-4 desaturase no 0.68
20 mRNA_4640 13008 KOG1399 Flavin-containing monooxygenase no 0.67