Top cofit genes for mRNA_3872 from Rhodosporidium toruloides IFO0880

mRNA_3872 12240 : KOG1001 Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1112 9480 Interpro Protein of unknown function (DUF3602) Protein of unknown function (DUF3602) 0 no 0.82
2 mRNA_2908 11276 KOG3098 Uncharacterized conserved protein no 0.80
3 mRNA_6122 14490 SUPERFAMILY--SSF53098 no 0.80
4 mRNA_2217 10585 KOG2199 Signal transducing adaptor protein STAM/STAM2 no 0.77
5 mRNA_5338 13706 K00891 E2.7.1.71, aroK, aroL shikimate kinase no 0.74
6 mRNA_2587 10955 K04368 MAP2K1, MEK1 mitogen-activated protein kinase kinase 1 no 0.73
7 mRNA_7172 15540 K01408 IDE, ide insulysin no 0.73
8 mRNA_3904 12272 KOG1176 Acyl-CoA synthetase no 0.72
9 mRNA_3675 12043 K11251 H2A histone H2A no 0.72
10 mRNA_1430 9798 KOG4205 RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 no 0.72
11 mRNA_4174 12542 KOG4305 RhoGEF GTPase no 0.71
12 mRNA_3891 12259 K07889 RAB5C Ras-related protein Rab-5C no 0.71
13 mRNA_4270 12638 Hypothetical Protein no 0.71
14 mRNA_3558 11926 K14808 DDX54, DBP10 ATP-dependent RNA helicase DDX54/DBP10 no 0.71
15 mRNA_5646 14014 K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase no 0.70
16 mRNA_5918 14286 K11498 CENPE centromeric protein E no 0.70
17 mRNA_833 9201 HMMPfam-Homeobox domain-PF00046,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SMART-Homeodomain-SM00389,SUPERFAMILY--SSF46689 no 0.70
18 mRNA_3967 12335 KOG1972 Uncharacterized conserved protein no 0.70
19 mRNA_5383 13751 Hypothetical Protein no 0.69
20 mRNA_5586 13954 HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874 no 0.69