Top cofit genes for mRNA_3871 from Rhodosporidium toruloides IFO0880

mRNA_3871 12239 : K10295 FBXO9 F-box protein 9

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_8460 16828 KOG0527 HMG-box transcription factor no 0.73
2 mRNA_2800 11168 SUPERFAMILY--SSF52047 no 0.70
3 mRNA_7210 15578 K15271 HFM1, MER3 ATP-dependent DNA helicase HFM1/MER3 no 0.70
4 mRNA_5198 13566 KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases no 0.69
5 mRNA_4810 13178 KOG1304 Amino acid transporters no 0.68
6 mRNA_7211 15579 HMMPfam-Fungal specific transcription factor domain-PF11951,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,SUPERFAMILY--SSF57701 no 0.67
7 mRNA_6702 15070 K08192 DAL MFS transporter, ACS family, allantoate permease no 0.66
8 mRNA_2368 10736 Hypothetical Protein no 0.66
9 mRNA_5424 13792 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) no 0.65
10 mRNA_5703 14071 KOG1289 Amino acid transporters no 0.65
11 mRNA_4324 12692 K18754 LIN28 protein lin-28 no 0.65
12 mRNA_7947 16315 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 no 0.62
13 mRNA_5637 14005 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.62
14 mRNA_3974 12342 K02350 POLZ1, rev3 DNA polymerase zeta no 0.62
15 mRNA_2431 10799 Hypothetical Protein no 0.62
16 mRNA_580 8948 Hypothetical Protein no 0.61
17 mRNA_1452 9820 K07241 nixA high-affinity nickel-transport protein no 0.61
18 mRNA_4818 13186 BLAST Putative BTB domain transcription factor [Penicillium... no 0.61
19 mRNA_6281 14649 HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909 no 0.60
20 mRNA_6431 14799 Hypothetical Protein no 0.60