Top cofit genes for mRNA_3870 from Rhodosporidium toruloides IFO0880

mRNA_3870 12238 : HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407,SUPERFAMILY--SSF53448

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2989 11357 SUPERFAMILY--SSF103473 no 0.83
2 mRNA_5948 14316 HMMPfam-Zinc finger C-x8-C-x5-C-x3-H type-PF14608,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,SMART-zinc finger-SM00356 no 0.76
3 mRNA_5284 13652 Hypothetical Protein no 0.74
4 mRNA_7105 15473 KOG1890 Phosphoinositide phosphatase SAC1 no 0.72
5 mRNA_807 9175 Hypothetical Protein no 0.71
6 mRNA_50 8418 KOG1611 Predicted short chain-type dehydrogenase no 0.70
7 mRNA_5897 14265 Interpro Mitochondrial import receptor subunit or translocase no 0.70
8 mRNA_3883 12251 K01784 galE, GALE UDP-glucose 4-epimerase no 0.69
9 mRNA_6817 15185 KOG3525 Subtilisin-like proprotein convertase no 0.69
10 mRNA_2961 11329 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
11 mRNA_2365 10733 HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562 no 0.67
12 mRNA_5338 13706 K00891 E2.7.1.71, aroK, aroL shikimate kinase no 0.67
13 mRNA_4240 12608 KOG1700 Regulatory protein MLP and related LIM proteins no 0.66
14 mRNA_5516 13884 Hypothetical Protein no 0.66
15 mRNA_366 8734 HMMPfam-Thioredoxin-like-PF13905,SUPERFAMILY--SSF52833 no 0.66
16 mRNA_7107 15475 KOG2950 Uncharacterized protein involved in protein-protein interaction, contains polyproline-binding GYF domain no 0.66
17 mRNA_431 8799 HMMPfam-SH3-binding, glutamic acid-rich protein-PF04908,ProSiteProfiles-Glutaredoxin domain profile.-PS51354,SUPERFAMILY--SSF52833 no 0.66
18 mRNA_7037 15405 K08254 E3.2.1.59 glucan endo-1,3-alpha-glucosidase no 0.65
19 mRNA_5422 13790 HMMPfam-Domain of unknown function (DUF336)-PF03928,SUPERFAMILY--SSF143744 no 0.65
20 mRNA_3600 11968 HMMPfam-PWWP domain-PF00855,ProSiteProfiles-PWWP domain profile.-PS50812,SMART-domain with conserved PWWP motif-SM00293,SUPERFAMILY--SSF63748 no 0.65