Top cofit genes for mRNA_3867 from Rhodosporidium toruloides IFO0880

mRNA_3867 12235 : KOG1812 Predicted E3 ubiquitin ligase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4939 13307 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.71
2 mRNA_8359 16727 Hypothetical Protein no 0.68
3 mRNA_3627 11995 SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126 no 0.68
4 mRNA_4591 12959 KOG0379 Kelch repeat-containing proteins no 0.67
5 mRNA_4073 12441 KOG0961 Predicted Zn2+-dependent endopeptidase, insulinase superfamily no 0.66
6 mRNA_5549 13917 K00027 ME2, sfcA, maeA malate dehydrogenase (oxaloacetate-decarboxylating) no 0.65
7 mRNA_1369 9737 HMMPfam-Glutathione S-transferase, N-terminal domain-PF13417,ProSiteProfiles-Soluble glutathione S-transferase N-terminal domain profile.-PS50404,ProSiteProfiles-Soluble glutathione S-transferase C-terminal domain profile.-PS50405,SUPERFAMILY--SSF52833 no 0.65
8 mRNA_6473 14841 HMMPfam-XPG domain containing-PF12813,SUPERFAMILY--SSF88723 no 0.65
9 mRNA_187 8555 Hypothetical Protein no 0.65
10 mRNA_7441 15809 K08884 K08884 serine/threonine protein kinase, bacterial no 0.65
11 mRNA_1077 9445 BLAST expressed protein [Cryptococcus neoformans var. neofo... no 0.64
12 mRNA_8241 16609 Hypothetical Protein no 0.63
13 mRNA_7617 15985 Hypothetical Protein no 0.63
14 mRNA_7518 15886 KOG2641 Predicted seven transmembrane receptor - rhodopsin family no 0.63
15 mRNA_1477 9845 Hypothetical Protein no 0.63
16 mRNA_6775 15143 K14784 CMS1 protein CMS1 no 0.62
17 mRNA_1198 9566 Hypothetical Protein no 0.61
18 mRNA_5167 13535 Hypothetical Protein no 0.61
19 mRNA_1211 9579 K15078 SLX1 structure-specific endonuclease subunit SLX1 no 0.61
20 mRNA_3734 12102 Interpro Protein HRI1 no 0.60