Top cofit genes for mRNA_3821 from Rhodosporidium toruloides IFO0880

mRNA_3821 12189 : K19001 HELLS, DDM1 ATP-dependent DNA helicase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1799 10167 KOG2489 Transmembrane protein no 0.79
2 mRNA_3891 12259 K07889 RAB5C Ras-related protein Rab-5C no 0.74
3 mRNA_4270 12638 Hypothetical Protein no 0.74
4 mRNA_1125 9493 K20465 OSBPL9_10_11, ORP9_10_11 oxysterol-binding protein-related protein 9/10/11 no 0.73
5 mRNA_3883 12251 K01784 galE, GALE UDP-glucose 4-epimerase no 0.73
6 mRNA_8136 16504 KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies no 0.72
7 mRNA_1951 10319 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.71
8 mRNA_5915 14283 HMMPfam-Tannase and feruloyl esterase-PF07519,SUPERFAMILY--SSF53474 no 0.71
9 mRNA_3436 11804 HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817 no 0.71
10 mRNA_2485 10853 K07760 CDK cyclin-dependent kinase no 0.71
11 mRNA_2908 11276 KOG3098 Uncharacterized conserved protein no 0.71
12 mRNA_3497 11865 HMMPfam-Ubiquitin family-PF00240,ProSiteProfiles-Ubiquitin domain profile.-PS50053,SMART-Ubiquitin homologues-SM00213,SUPERFAMILY--SSF54236 no 0.70
13 mRNA_4091 12459 K03362 FBXW1_11, BTRC, beta-TRCP F-box and WD-40 domain protein 1/11 no 0.70
14 mRNA_2401 10769 HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300 no 0.70
15 mRNA_374 8742 Hypothetical Protein no 0.69
16 mRNA_14 8382 K07199 PRKAB 5'-AMP-activated protein kinase, regulatory beta subunit no 0.69
17 mRNA_774 9142 K17457 PPP1R12C, MBS85 protein phosphatase 1 regulatory subunit 12C no 0.69
18 mRNA_4182 12550 K13288 orn, REX2, REXO2 oligoribonuclease no 0.69
19 mRNA_4240 12608 KOG1700 Regulatory protein MLP and related LIM proteins no 0.68
20 mRNA_8231 16599 KOG0927 Predicted transporter (ABC superfamily) no 0.68