Top cofit genes for mRNA_3792 from Rhodosporidium toruloides IFO0880

mRNA_3792 12160 : K12811 DDX46, PRP5 ATP-dependent RNA helicase DDX46/PRP5

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2040 10408 K11729 ACAD10 acyl-CoA dehydrogenase family member 10 no 0.87
2 mRNA_5877 14245 K00624 E2.3.1.7 carnitine O-acetyltransferase no 0.86
3 mRNA_299 8667 ProSiteProfiles-SET domain profile.-PS50280,SUPERFAMILY--SSF82199 no 0.86
4 mRNA_6437 14805 K07511 ECHS1 enoyl-CoA hydratase no 0.85
5 mRNA_5031 13399 HMMPfam-PAS fold-PF00989,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,ProSiteProfiles-PAS repeat profile.-PS50112,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF55785 no 0.84
6 mRNA_707 9075 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.83
7 mRNA_5654 14022 K01637 E4.1.3.1, aceA isocitrate lyase no 0.83
8 mRNA_1468 9836 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.83
9 mRNA_4175 12543 K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6 no 0.83
10 mRNA_568 8936 K14454 GOT1 aspartate aminotransferase, cytoplasmic no 0.82
11 mRNA_2408 10776 K07975 K07975 Rho family, other no 0.82
12 mRNA_3170 11538 Hypothetical Protein no 0.81
13 mRNA_6199 14567 HMMPfam-Phosphotransferase enzyme family-PF01636,SUPERFAMILY--SSF56112 no 0.80
14 mRNA_4484 12852 KOG2588 Predicted DNA-binding protein no 0.80
15 mRNA_5702 14070 K09478 ACADSB short/branched chain acyl-CoA dehydrogenase no 0.79
16 mRNA_4374 12742 K00232 E1.3.3.6, ACOX1, ACOX3 acyl-CoA oxidase no 0.79
17 mRNA_2763 11131 Hypothetical Protein no 0.79
18 mRNA_7137 15505 KOG1933 Cholesterol transport protein (Niemann-Pick C disease protein) no 0.79
19 mRNA_2949 11317 K02267 COX6B cytochrome c oxidase subunit 6b no 0.79
20 mRNA_305 8673 HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648 no 0.79