Top cofit genes for mRNA_3787 from Rhodosporidium toruloides IFO0880

mRNA_3787 12155 : K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5213 13581 Hypothetical Protein no 0.78
2 mRNA_7943 16311 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.75
3 mRNA_6943 15311 SUPERFAMILY--SSF52047 no 0.74
4 mRNA_186 8554 Hypothetical Protein no 0.73
5 mRNA_7737 16105 HMMPfam-Antibiotic biosynthesis monooxygenase-PF03992,SUPERFAMILY--SSF54909 no 0.73
6 mRNA_4477 12845 HMMPfam-CFEM domain-PF05730,SMART--SM00747 no 0.73
7 mRNA_5496 13864 HMMPfam-HSF-type DNA-binding-PF00447,SUPERFAMILY--SSF46785 no 0.72
8 mRNA_3661 12029 Hypothetical Protein no 0.72
9 mRNA_2508 10876 BLAST proteophosphoglycan ppg4 [Lichtheimia corymbifera JMR... no 0.72
10 mRNA_6768 15136 HMMPfam-DNA repair protein endonuclease SAE2/CtIP C-terminus-PF08573 no 0.71
11 mRNA_5477 13845 K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11 no 0.70
12 mRNA_7158 15526 K09529 DNAJC9 DnaJ homolog subfamily C member 9 no 0.70
13 mRNA_1840 10208 Hypothetical Protein no 0.70
14 mRNA_8103 16471 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.69
15 mRNA_6656 15024 KOG1674 Cyclin no 0.69
16 mRNA_8097 16465 KOG0118 FOG RRM domain no 0.69
17 mRNA_6482 14850 Hypothetical Protein no 0.68
18 mRNA_2033 10401 K09595 HM13 minor histocompatibility antigen H13 no 0.68
19 mRNA_4629 12997 K11971 RNF14, ARA54 E3 ubiquitin-protein ligase RNF14 no 0.68
20 mRNA_388 8756 Hypothetical Protein no 0.68