Top cofit genes for mRNA_3776 from Rhodosporidium toruloides IFO0880

mRNA_3776 12144 : HMMPfam-FHA domain-PF00498,HMMPfam-Ring finger domain-PF13639,ProSiteProfiles-Forkhead-associated (FHA) domain profile.-PS50006,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SMART-Ring finger-SM00184,SMART-Forkhead associated domain-SM00240,SUPERFAMILY--SSF49879,SUPERFAMILY--SSF57850

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5167 13535 Hypothetical Protein no 0.70
2 mRNA_6661 15029 K11699 RDR, RDRP RNA-dependent RNA polymerase no 0.70
3 mRNA_8119 16487 Hypothetical Protein no 0.70
4 mRNA_3157 11525 K00942 E2.7.4.8, gmk guanylate kinase no 0.70
5 mRNA_6365 14733 HMMPfam-Trypsin-like peptidase domain-PF13365,SUPERFAMILY--SSF50494 no 0.69
6 mRNA_1449 9817 K03325 TC.ACR3 arsenite transporter, ACR3 family no 0.64
7 mRNA_5296 13664 Hypothetical Protein no 0.63
8 mRNA_1376 9744 HMMPfam-Helix-loop-helix DNA-binding domain-PF00010,ProSiteProfiles-Myc-type, basic helix-loop-helix (bHLH) domain profile.-PS50888,SUPERFAMILY--SSF47459 no 0.62
9 mRNA_3335 11703 Hypothetical Protein no 0.62
10 mRNA_2014 10382 K20697 GNBP1 gram-negative bacteria-binding protein 1 no 0.62
11 mRNA_5637 14005 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.61
12 mRNA_1372 9740 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 no 0.61
13 mRNA_442 8810 K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15 no 0.61
14 mRNA_5805 14173 HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324 no 0.61
15 mRNA_5589 13957 HMMPfam-Region in Clathrin and VPS-PF00637,ProSiteProfiles-Clathrin heavy-chain (CHCR) repeat profile.-PS50236,SMART-Clathrin heavy chain repeat homology-SM00299,SUPERFAMILY--SSF48371 no 0.61
16 mRNA_5789 14157 KOG2859 DNA repair protein, member of the recA/RAD51 family no 0.61
17 mRNA_3515 11883 K01277 DPP3 dipeptidyl-peptidase III no 0.60
18 mRNA_2368 10736 Hypothetical Protein no 0.60
19 mRNA_174 8542 HMMPfam-Glyoxal oxidase N-terminus-PF07250,HMMPfam-Domain of unknown function (DUF1929)-PF09118,SUPERFAMILY--SSF50965,SUPERFAMILY--SSF81296 no 0.60
20 mRNA_5898 14266 Hypothetical Protein no 0.60