Top cofit genes for mRNA_3677 from Rhodosporidium toruloides IFO0880

mRNA_3677 12045 : KOG0266 WD40 repeat-containing protein

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_927 9295 KOG1611 Predicted short chain-type dehydrogenase no 0.85
2 mRNA_2162 10530 K15027 EIF2D translation initiation factor 2D no 0.84
3 mRNA_6139 14507 Hypothetical Protein no 0.83
4 mRNA_5615 13983 HMMPfam-GRF zinc finger-PF06839 no 0.82
5 mRNA_4082 12450 KOG2194 Aminopeptidases of the M20 family no 0.80
6 mRNA_4215 12583 HMMPfam-RhoGAP domain-PF00620,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-Fes/CIP4 homology domain-SM00055,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF48350 no 0.80
7 mRNA_3556 11924 KOG0254 Predicted transporter (major facilitator superfamily) no 0.77
8 mRNA_6325 14693 Hypothetical Protein no 0.76
9 mRNA_3650 12018 Hypothetical Protein no 0.75
10 mRNA_7367 15735 HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 no 0.75
11 mRNA_8001 16369 K01092 E3.1.3.25, IMPA, suhB myo-inositol-1(or 4)-monophosphatase no 0.74
12 mRNA_7507 15875 K17987 NBR1 next to BRCA1 gene 1 protein no 0.74
13 mRNA_7908 16276 K03783 punA, PNP purine-nucleoside phosphorylase no 0.74
14 mRNA_7884 16252 KOG1911 Heterochromatin-associated protein HP1 and related CHROMO domain proteins no 0.74
15 mRNA_3623 11991 HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928 no 0.73
16 mRNA_4173 12541 KOG2348 Urea transporter no 0.73
17 mRNA_5059 13427 KOG0022 Alcohol dehydrogenase, class III no 0.73
18 mRNA_5326 13694 K00020 mmsB, HIBADH 3-hydroxyisobutyrate dehydrogenase no 0.72
19 mRNA_7981 16349 KOG2504 Monocarboxylate transporter no 0.72
20 mRNA_4550 12918 K16186 RRAGC_D Ras-related GTP-binding protein C/D no 0.72