Top cofit genes for mRNA_3548 from Rhodosporidium toruloides IFO0880

mRNA_3548 11916 : K19307 BMT5 25S rRNA (uracil2634-N3)-methyltransferase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3886 12254 K14298 RAE1, GLE2 mRNA export factor no 0.79
2 mRNA_5668 14036 K01227 E3.2.1.96 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase no 0.76
3 mRNA_2302 10670 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.73
4 mRNA_5856 14224 K03357 APC10, DOC1 anaphase-promoting complex subunit 10 no 0.72
5 mRNA_7348 15716 KOG0364 Chaperonin complex component, TCP-1 gamma subunit (CCT3) no 0.70
6 mRNA_6196 14564 Hypothetical Protein no 0.68
7 mRNA_2066 10434 SUPERFAMILY--SSF52047 no 0.68
8 mRNA_3595 11963 K09838 ZEP, ABA1 zeaxanthin epoxidase no 0.67
9 mRNA_4732 13100 HMMPfam-Major intrinsic protein-PF00230,PRINTS-Major intrinsic protein family signature-PR00783,SUPERFAMILY--SSF81338 no 0.67
10 mRNA_2961 11329 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.67
11 mRNA_5053 13421 Hypothetical Protein no 0.66
12 mRNA_4515 12883 SUPERFAMILY--SSF51735 no 0.66
13 mRNA_6270 14638 KOG2645 Type I phosphodiesterase/nucleotide pyrophosphatase no 0.65
14 mRNA_7821 16189 Hypothetical Protein no 0.65
15 mRNA_3361 11729 K11247 SH3GL endophilin-A no 0.64
16 mRNA_5576 13944 Interpro GDP-fucose protein O-fucosyltransferase no 0.63
17 mRNA_4338 12706 SUPERFAMILY--SSF53098 no 0.63
18 mRNA_705 9073 Hypothetical Protein no 0.63
19 mRNA_6641 15009 K11863 ATXN3, MJD Ataxin-3 no 0.61
20 mRNA_6207 14575 KOG2711 Glycerol-3-phosphate dehydrogenase/dihydroxyacetone 3-phosphate reductase no 0.61