Top cofit genes for mRNA_3511 from Rhodosporidium toruloides IFO0880

mRNA_3511 11879 : K10875 RAD54L, RAD54 DNA repair and recombination protein RAD54 and RAD54-like protein

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5978 14346 Hypothetical Protein no 0.81
2 mRNA_6093 14461 HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744 no 0.76
3 mRNA_3310 11678 HMMPfam-Fungal specific transcription factor domain-PF04082,SMART-Fungal specific transcription factor domain-SM00906 no 0.75
4 mRNA_5021 13389 K14347 SLC10A7, P7 solute carrier family 10 (sodium/bile acid cotransporter), member 7 no 0.75
5 mRNA_6276 14644 K12615 EDC3 enhancer of mRNA-decapping protein 3 no 0.73
6 mRNA_7180 15548 Hypothetical Protein no 0.72
7 mRNA_7168 15536 HMMPfam-WD domain, G-beta repeat-PF00400,HMMPfam-PFU (PLAA family ubiquitin binding)-PF09070,PRINTS-G protein beta WD-40 repeat signature-PR00320,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-PFU domain profile.-PS51394,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978 no 0.72
8 mRNA_3092 11460 KOG4784 Uncharacterized conserved protein no 0.71
9 mRNA_2899 11267 K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2 no 0.71
10 mRNA_6395 14763 K19403 MCPH1 microcephalin no 0.71
11 mRNA_1240 9608 Interpro Protein of unknown function (DUF1275) 0 no 0.70
12 mRNA_3009 11377 Hypothetical Protein no 0.70
13 mRNA_6253 14621 HMMPfam-FR47-like protein-PF08445,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729 no 0.69
14 mRNA_4788 13156 KOG0143 Iron/ascorbate family oxidoreductases no 0.68
15 mRNA_5117 13485 KOG0254 Predicted transporter (major facilitator superfamily) no 0.68
16 mRNA_404 8772 HMMPfam-PB1 domain-PF00564,HMMPfam-Zinc finger, ZZ type-PF00569,ProSitePatterns-Zinc finger ZZ-type signature.-PS01357,ProSiteProfiles-Zinc finger ZZ-type profile.-PS50135,SMART-Zinc-binding domain, present in Dystrophin, CREB-binding protein.-SM00291,SUPERFAMILY--SSF54277,SUPERFAMILY--SSF57850 no 0.68
17 mRNA_8458 16826 Hypothetical Protein no 0.68
18 mRNA_7237 15605 Hypothetical Protein no 0.68
19 mRNA_6399 14767 HMMPfam-bZIP transcription factor-PF00170,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959 no 0.67
20 mRNA_6739 15107 BLAST polysaccharide lyase family 14 protein [Mixia osm... no 0.67