Top cofit genes for mRNA_3504 from Rhodosporidium toruloides IFO0880

mRNA_3504 11872 : HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4190 12558 Hypothetical Protein no 0.85
2 mRNA_5042 13410 K11987 PTGS2, COX2 prostaglandin-endoperoxide synthase 2 no 0.85
3 mRNA_5846 14214 K04508 TBL1 transducin (beta)-like 1 no 0.84
4 mRNA_7242 15610 K01265 map methionyl aminopeptidase no 0.83
5 mRNA_1156 9524 Hypothetical Protein no 0.83
6 mRNA_967 9335 HMMPfam-Starch binding domain-PF00686,SUPERFAMILY--SSF49452 no 0.80
7 mRNA_7009 15377 Hypothetical Protein no 0.80
8 mRNA_6582 14950 K11517 HAO (S)-2-hydroxy-acid oxidase no 0.80
9 mRNA_1538 9906 K20307 TRAPPC10, TRS130 trafficking protein particle complex subunit 10 no 0.79
10 mRNA_1560 9928 HMMPfam-Bromodomain-PF00439,ProSiteProfiles-Bromodomain profile.-PS50014,SMART-bromo domain-SM00297,SUPERFAMILY--SSF47370 no 0.78
11 mRNA_440 8808 HMMPfam-G protein-coupled glucose receptor regulating Gpa2-PF11710,SUPERFAMILY--SSF81321 no 0.78
12 mRNA_1044 9412 K07765 MBTPS2 S2P endopeptidase no 0.77
13 mRNA_437 8805 Hypothetical Protein no 0.77
14 mRNA_7679 16047 K12861 BCAS2 pre-mRNA-splicing factor SPF27 no 0.75
15 mRNA_6878 15246 Hypothetical Protein no 0.74
16 mRNA_7419 15787 Hypothetical Protein no 0.74
17 mRNA_1929 10297 K07880 RAB4B Ras-related protein Rab-4B no 0.74
18 mRNA_4869 13237 K03364 CDH1 cell division cycle 20-like protein 1, cofactor of APC complex no 0.74
19 mRNA_7820 16188 Hypothetical Protein no 0.73
20 mRNA_5734 14102 K01183 E3.2.1.14 chitinase no 0.73