Top cofit genes for mRNA_3501 from Rhodosporidium toruloides IFO0880

mRNA_3501 11869 : KOG3791 Predicted RNA-binding protein involved in translational regulation

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_430 8798 K13704 ABHD12 abhydrolase domain-containing protein 12 no 0.80
2 mRNA_8221 16589 KOG3140 Predicted membrane protein no 0.76
3 mRNA_550 8918 KOG4391 Predicted alpha/beta hydrolase BEM46 no 0.75
4 mRNA_7526 15894 K13289 CTSA, CPY cathepsin A (carboxypeptidase C) no 0.72
5 mRNA_7091 15459 ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157 no 0.72
6 mRNA_3633 12001 KOG1074 Transcriptional repressor SALM no 0.72
7 mRNA_2515 10883 KOG0035 Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) no 0.72
8 mRNA_919 9287 KOG1397 Ca2+/H+ antiporter VCX1 and related proteins no 0.71
9 mRNA_5247 13615 HMMPfam-Basic region leucine zipper-PF07716,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,ProSiteProfiles-Basic-leucine zipper (bZIP) domain profile.-PS50217,SMART-basic region leucin zipper-SM00338,SUPERFAMILY--SSF57959 no 0.71
10 mRNA_2701 11069 HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448 no 0.71
11 mRNA_6644 15012 HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744 no 0.71
12 mRNA_3136 11504 KOG2615 Permease of the major facilitator superfamily no 0.71
13 mRNA_2363 10731 KOG0017 FOG Transposon-encoded proteins with TYA, reverse transcriptase, integrase domains in various combinations no 0.70
14 mRNA_5192 13560 KOG2814 Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) no 0.70
15 mRNA_7328 15696 KOG1339 Aspartyl protease no 0.69
16 mRNA_2669 11037 Hypothetical Protein no 0.69
17 mRNA_7187 15555 K00799 GST, gst glutathione S-transferase no 0.68
18 mRNA_7984 16352 KOG3030 Lipid phosphate phosphatase and related enzymes of the PAP2 family no 0.68
19 mRNA_1843 10211 Hypothetical Protein no 0.68
20 mRNA_789 9157 K14459 HEX hexosaminidase no 0.68