Top cofit genes for mRNA_3451 from Rhodosporidium toruloides IFO0880

mRNA_3451 11819 : HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2427 10795 Hypothetical Protein no 0.81
2 mRNA_29 8397 HMMPfam-Swi5-PF07061 no 0.78
3 mRNA_4986 13354 K17943 PUM pumilio RNA-binding family no 0.75
4 mRNA_1497 9865 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.75
5 mRNA_2982 11350 Hypothetical Protein no 0.74
6 mRNA_4783 13151 Hypothetical Protein no 0.74
7 mRNA_5754 14122 KOG1721 FOG Zn-finger no 0.74
8 mRNA_2685 11053 Hypothetical Protein no 0.74
9 mRNA_5707 14075 Hypothetical Protein no 0.72
10 mRNA_6101 14469 KOG1303 Amino acid transporters no 0.71
11 mRNA_2986 11354 K19176 FAAH2 fatty acid amide hydrolase 2 no 0.71
12 mRNA_43 8411 K05609 UCHL3, YUH1 ubiquitin carboxyl-terminal hydrolase L3 no 0.71
13 mRNA_5107 13475 K03130 TAF5 transcription initiation factor TFIID subunit 5 no 0.71
14 mRNA_2614 10982 K18050 PRKCE novel protein kinase C epsilon type no 0.71
15 mRNA_4717 13085 BLAST putative proteasome regulatory subunit 12 [Rhizoctoni... no 0.71
16 mRNA_3955 12323 K02355 fusA, GFM, EFG elongation factor G no 0.71
17 mRNA_6012 14380 Hypothetical Protein no 0.71
18 mRNA_2795 11163 SUPERFAMILY--SSF56112 no 0.71
19 mRNA_1343 9711 K00698 CHS1 chitin synthase no 0.70
20 mRNA_5417 13785 ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.70