Top cofit genes for mRNA_3374 from Rhodosporidium toruloides IFO0880

mRNA_3374 11742 : KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4340 12708 K01074 PPT palmitoyl-protein thioesterase no 0.85
2 mRNA_6455 14823 KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins no 0.84
3 mRNA_1721 10089 K11483 HOS2 histone deacetylase HOS2 no 0.83
4 mRNA_2889 11257 K08184 SLC16A7 MFS transporter, MCP family, solute carrier family 16 (monocarboxylic acid transporters), member 7 no 0.83
5 mRNA_2007 10375 K15331 TRMT2B, TRM2 tRNA (uracil-5-)-methyltransferase no 0.83
6 mRNA_1245 9613 HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481 no 0.83
7 mRNA_7147 15515 Hypothetical Protein no 0.82
8 mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.81
9 mRNA_6129 14497 Hypothetical Protein no 0.81
10 mRNA_4841 13209 HMMPfam-Anaphase-promoting complex subunit 5-PF12862 no 0.81
11 mRNA_6180 14548 KOG0218 Mismatch repair MSH3 no 0.81
12 mRNA_5807 14175 HMMPfam-Protein of unknown function (DUF2638)-PF10937 no 0.80
13 mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.80
14 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.79
15 mRNA_8483 16851 BLAST GA28568 gene product from transcript GA28568-RA [Rhiz... no 0.79
16 mRNA_460 8828 K15177 LEO1 RNA polymerase-associated protein LEO1 no 0.79
17 mRNA_8188 16556 K05012 CLCN3_4_5 chloride channel 3/4/5 no 0.79
18 mRNA_4362 12730 KOG0907 Thioredoxin no 0.78
19 mRNA_8205 16573 K11339 MORF4L1, MRG15, EAF3 mortality factor 4-like protein 1 no 0.78
20 mRNA_2804 11172 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 no 0.77