Top cofit genes for mRNA_3369 from Rhodosporidium toruloides IFO0880

mRNA_3369 11737 : KOG2659 LisH motif-containing protein

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3201 11569 K12175 GPS1, COPS1, CSN1 COP9 signalosome complex subunit 1 no 0.85
2 mRNA_8457 16825 K02728 PSMA4 20S proteasome subunit alpha 3 no 0.84
3 mRNA_6952 15320 K11858 USP48 ubiquitin carboxyl-terminal hydrolase 48 no 0.83
4 mRNA_2595 10963 K14012 SHP1, UBX1, NSFL1C UBX domain-containing protein 1 no 0.80
5 mRNA_4361 12729 K10576 UBE2H, UBC8 ubiquitin-conjugating enzyme E2 H no 0.78
6 mRNA_8304 16672 K01336 E3.4.21.48 cerevisin no 0.78
7 mRNA_6531 14899 K19940 SEC2 Rab guanine nucleotide exchange factor SEC2 no 0.77
8 mRNA_5365 13733 K00107 ALO D-arabinono-1,4-lactone oxidase no 0.76
9 mRNA_5175 13543 K08341 GABARAP, ATG8, LC3 GABA(A) receptor-associated protein no 0.76
10 mRNA_5105 13473 HMMPfam-Frequency clock protein-PF09421 no 0.75
11 mRNA_4584 12952 KOG2217 U4/U6.U5 snRNP associated protein no 0.75
12 mRNA_5670 14038 K18995 DHX29 ATP-dependent RNA helicase DHX29 no 0.74
13 mRNA_5757 14125 HMMPfam-Glycosyl hydrolase catalytic core-PF11790,SUPERFAMILY--SSF51445 no 0.74
14 mRNA_1418 9786 HMMPfam-Fungal protein of unknown function (DUF1748)-PF08520 no 0.74
15 mRNA_6904 15272 HMMPfam-CTLH/CRA C-terminal to LisH motif domain-PF10607,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-CT11-RanBPM-SM00757 no 0.73
16 mRNA_1574 9942 K06867 K06867 uncharacterized protein no 0.73
17 mRNA_470 8838 KOG0714 Molecular chaperone (DnaJ superfamily) no 0.73
18 mRNA_2166 10534 Hypothetical Protein no 0.73
19 mRNA_2381 10749 KOG4660 Protein Mei2, essential for commitment to meiosis, and related proteins no 0.72
20 mRNA_5246 13614 K00411 UQCRFS1, RIP1, petA ubiquinol-cytochrome c reductase iron-sulfur subunit no 0.72