Top cofit genes for mRNA_3322 from Rhodosporidium toruloides IFO0880

mRNA_3322 11690 : HMMPfam-Ribosomal RNA-processing protein 7 (RRP7)-PF12923

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3025 11393 K11354 cph1 two-component system, chemotaxis family, sensor kinase Cph1 no 0.78
2 mRNA_6253 14621 HMMPfam-FR47-like protein-PF08445,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729 no 0.76
3 mRNA_3843 12211 HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232 no 0.75
4 mRNA_4734 13102 Hypothetical Protein no 0.74
5 mRNA_5706 14074 Hypothetical Protein no 0.74
6 mRNA_3611 11979 Hypothetical Protein no 0.74
7 mRNA_1366 9734 K00661 maa maltose O-acetyltransferase no 0.74
8 mRNA_49 8417 K03133 TAF9B, TAF9 transcription initiation factor TFIID subunit 9B no 0.73
9 mRNA_8347 16715 Hypothetical Protein no 0.73
10 mRNA_824 9192 Hypothetical Protein no 0.72
11 mRNA_4063 12431 K10777 LIG4, DNL4 DNA ligase 4 no 0.71
12 mRNA_853 9221 K13125 NOSIP nitric oxide synthase-interacting protein no 0.71
13 mRNA_3898 12266 HMMPfam-Acetyltransferase (GNAT) domain-PF13508,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729 no 0.70
14 mRNA_7141 15509 BLAST AP-4 complex subunit epsilon [Leucoagaricus sp. SymC.... no 0.70
15 mRNA_2229 10597 HMMPfam-Hsp70 protein-PF00012,PRINTS-70kDa heat shock protein signature-PR00301,ProSitePatterns-Heat shock hsp70 proteins family signature 2.-PS00329,ProSitePatterns-Heat shock hsp70 proteins family signature 3.-PS01036,SUPERFAMILY--SSF100934,SUPERFAMILY--SSF53067 no 0.70
16 mRNA_5935 14303 HMMPfam-Homeobox KN domain-PF05920,ProSiteProfiles-'Homeobox' domain profile.-PS50071,SUPERFAMILY--SSF46689 no 0.70
17 mRNA_5978 14346 Hypothetical Protein no 0.69
18 mRNA_8198 16566 K03190 ureD, ureH urease accessory protein no 0.69
19 mRNA_3096 11464 K17262 TBCB, CKAP1, ALF1 tubulin-folding cofactor B no 0.69
20 mRNA_8416 16784 BLAST Protein byr4 [Hypsizygus marmoreus] no 0.68