Top cofit genes for mRNA_3284 from Rhodosporidium toruloides IFO0880

mRNA_3284 11652 : BLAST something about silencing, SAS, complex subunit 4 [Rh...

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1721 10089 K11483 HOS2 histone deacetylase HOS2 no 0.87
2 mRNA_7411 15779 K02537 MAD2 mitotic spindle assembly checkpoint protein MAD2 no 0.86
3 mRNA_7147 15515 Hypothetical Protein no 0.85
4 mRNA_5921 14289 K14789 NOP6 nucleolar protein 6 no 0.85
5 mRNA_1245 9613 HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481 no 0.85
6 mRNA_1204 9572 K11253 H3 histone H3 no 0.85
7 mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.84
8 mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.84
9 mRNA_8135 16503 K00804 GGPS1 geranylgeranyl diphosphate synthase, type III no 0.84
10 mRNA_2459 10827 KOG2747 Histone acetyltransferase (MYST family) no 0.83
11 mRNA_5169 13537 Hypothetical Protein no 0.82
12 mRNA_6019 14387 Hypothetical Protein no 0.82
13 mRNA_733 9101 K13954 yiaY alcohol dehydrogenase no 0.82
14 mRNA_3423 11791 KOG3655 Drebrins and related actin binding proteins no 0.81
15 mRNA_5756 14124 HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689 no 0.81
16 mRNA_3857 12225 Interpro Mysoin-binding motif of peroxisomes no 0.81
17 mRNA_7950 16318 K04802 PCNA proliferating cell nuclear antigen no 0.80
18 mRNA_2536 10904 K15601 KDM3 lysine-specific demethylase 3 no 0.80
19 mRNA_3040 11408 K17275 PLS1 plastin-1 no 0.80
20 mRNA_2007 10375 K15331 TRMT2B, TRM2 tRNA (uracil-5-)-methyltransferase no 0.80