Top cofit genes for mRNA_3220 from Rhodosporidium toruloides IFO0880

mRNA_3220 11588 : KOG0686 COP9 signalosome, subunit CSN1

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3537 11905 Hypothetical Protein no 0.77
2 mRNA_856 9224 KOG0828 Predicted E3 ubiquitin ligase no 0.77
3 mRNA_5862 14230 K14998 SURF1, SHY1 surfeit locus 1 family protein no 0.73
4 mRNA_7637 16005 K12197 CHMP1, VPS46, DID2 charged multivesicular body protein 1 no 0.70
5 mRNA_4986 13354 K17943 PUM pumilio RNA-binding family no 0.70
6 mRNA_5754 14122 KOG1721 FOG Zn-finger no 0.69
7 mRNA_97 8465 KOG2234 Predicted UDP-galactose transporter no 0.69
8 mRNA_2136 10504 K01613 psd, PISD phosphatidylserine decarboxylase no 0.69
9 mRNA_5586 13954 HMMPfam-Response regulator receiver domain-PF00072,HMMPfam-Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase-PF02518,ProSiteProfiles-Response regulatory domain profile.-PS50110,SMART-cheY-homologous receiver domain-SM00448,SUPERFAMILY--SSF52172,SUPERFAMILY--SSF55874 no 0.69
10 mRNA_6613 14981 K08740 MSH4 DNA mismatch repair protein MSH4 no 0.68
11 mRNA_4203 12571 K19842 ROM1_2 RHO1 GDP-GTP exchange protein 1/2 no 0.68
12 mRNA_4663 13031 K18619 CORO7 coronin-7 no 0.68
13 mRNA_5469 13837 HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins retinal binding site.-PS00327,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321 no 0.68
14 mRNA_4020 12388 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) no 0.67
15 mRNA_7894 16262 HMMPfam-Eisosome component PIL1-PF13805 no 0.66
16 mRNA_4905 13273 KOG2371 Molybdopterin biosynthesis protein no 0.66
17 mRNA_1618 9986 Hypothetical Protein no 0.66
18 mRNA_7324 15692 K20967 MOCS1 GTP 3',8-cyclase / cyclic pyranopterin monophosphate synthase no 0.65
19 mRNA_2865 11233 SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717 no 0.65
20 mRNA_3959 12327 K10401 KIF18_19 kinesin family member 18/19 no 0.65