Top cofit genes for mRNA_3205 from Rhodosporidium toruloides IFO0880

mRNA_3205 11573 : K13281 uvsE, UVE1 UV DNA damage endonuclease

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4387 12755 HMMPfam-Ctf8-PF09696 no 0.82
2 mRNA_4328 12696 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383 no 0.79
3 mRNA_6196 14564 Hypothetical Protein no 0.78
4 mRNA_1546 9914 K18040 PTPN23 tyrosine-protein phosphatase non-receptor type 23 no 0.78
5 mRNA_5456 13824 K07034 K07034 uncharacterized protein no 0.78
6 mRNA_3749 12117 HMMPfam-Nuclear pore complex assembly-PF13934,SUPERFAMILY--SSF57850 no 0.77
7 mRNA_7147 15515 Hypothetical Protein no 0.77
8 mRNA_5954 14322 HMMPfam-Domain of unknown function (DUF2427)-PF10348,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665 no 0.76
9 mRNA_5294 13662 K02830 HRAD1, RAD17 cell cycle checkpoint protein no 0.76
10 mRNA_4889 13257 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.75
11 mRNA_2804 11172 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 no 0.75
12 mRNA_2516 10884 KOG0627 Heat shock transcription factor no 0.74
13 mRNA_925 9293 K10704 UBE2V ubiquitin-conjugating enzyme E2 variant no 0.74
14 mRNA_4075 12443 Hypothetical Protein no 0.74
15 mRNA_2536 10904 K15601 KDM3 lysine-specific demethylase 3 no 0.74
16 mRNA_4043 12411 Hypothetical Protein no 0.74
17 mRNA_8135 16503 K00804 GGPS1 geranylgeranyl diphosphate synthase, type III no 0.74
18 mRNA_7912 16280 K11434 PRMT1 type I protein arginine methyltransferase no 0.73
19 mRNA_3632 12000 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 no 0.72
20 mRNA_3886 12254 K14298 RAE1, GLE2 mRNA export factor no 0.72