Top cofit genes for mRNA_3177 from Rhodosporidium toruloides IFO0880

mRNA_3177 11545 : KOG2164 Predicted E3 ubiquitin ligase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_4202 12570 K00249 ACADM, acd acyl-CoA dehydrogenase no 0.86
2 mRNA_1334 9702 HMMPfam-RNA polymerase II transcription elongation factor-PF09816 no 0.82
3 mRNA_2780 11148 KOG0546 HSP90 co-chaperone CPR7/Cyclophilin no 0.80
4 mRNA_1430 9798 KOG4205 RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1 no 0.79
5 mRNA_3891 12259 K07889 RAB5C Ras-related protein Rab-5C no 0.77
6 mRNA_963 9331 K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 no 0.77
7 mRNA_7166 15534 K01626 E2.5.1.54, aroF, aroG, aroH 3-deoxy-7-phosphoheptulonate synthase no 0.77
8 mRNA_5872 14240 HMMPfam-Pleckstrin homology domain-PF15404,SMART-Pleckstrin homology domain.-SM00233 no 0.77
9 mRNA_1850 10218 K00311 ETFDH electron-transferring-flavoprotein dehydrogenase no 0.76
10 mRNA_2443 10811 HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113 no 0.76
11 mRNA_6441 14809 K07200 PRKAG 5'-AMP-activated protein kinase, regulatory gamma subunit no 0.76
12 mRNA_5693 14061 KOG4186 Peroxisomal biogenesis protein (peroxin) no 0.75
13 mRNA_4271 12639 K01196 AGL glycogen debranching enzyme no 0.75
14 mRNA_1419 9787 HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729 no 0.75
15 mRNA_8410 16778 K12761 SNF1 carbon catabolite-derepressing protein kinase no 0.75
16 mRNA_324 8692 K00135 gabD succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase no 0.75
17 mRNA_7663 16031 K03305 TC.POT proton-dependent oligopeptide transporter, POT family no 0.74
18 mRNA_3089 11457 BLAST Rho GTPase-activating protein 30 [Larimichthys crocea] no 0.73
19 mRNA_3622 11990 KOG0254 Predicted transporter (major facilitator superfamily) no 0.72
20 mRNA_7058 15426 KOG0206 P-type ATPase no 0.72