Top cofit genes for mRNA_3156 from Rhodosporidium toruloides IFO0880

mRNA_3156 11524 : K12662 PRPF4, PRP4 U4/U6 small nuclear ribonucleoprotein PRP4

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3187 11555 BLAST Protein disulfide-isomerase erp38 [Hypsizygus marmoreus] no 0.81
2 mRNA_7103 15471 Hypothetical Protein no 0.81
3 mRNA_1419 9787 HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729 no 0.73
4 mRNA_2678 11046 KOG3102 Uncharacterized conserved protein no 0.72
5 mRNA_714 9082 KOG1201 Hydroxysteroid 17-beta dehydrogenase 11 no 0.72
6 mRNA_1467 9835 HMMPfam-Mannosyl oligosaccharide glucosidase-PF03200,SUPERFAMILY--SSF48208 no 0.71
7 mRNA_6818 15186 KOG0729 26S proteasome regulatory complex, ATPase RPT1 no 0.70
8 mRNA_7111 15479 Interpro Subunit 11 of the general transcription factor TFIIH no 0.68
9 mRNA_74 8442 KOG3600 Thyroid hormone receptor-associated protein complex, subunit TRAP240 no 0.67
10 mRNA_1942 10310 HMMPfam-PLD-like domain-PF13091,ProSiteProfiles-Phospholipase D phosphodiesterase active site profile.-PS50035,SMART-Phospholipase D. Active site motifs.-SM00155,SUPERFAMILY--SSF56024 no 0.67
11 mRNA_6310 14678 Hypothetical Protein no 0.67
12 mRNA_2710 11078 BLAST putative protein (N-terminal fragment) [Melanopsichiu... no 0.66
13 mRNA_2310 10678 HMMPfam-AhpC/TSA antioxidant enzyme-PF13911,SUPERFAMILY--SSF52833 no 0.66
14 mRNA_2226 10594 SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717 no 0.66
15 mRNA_4828 13196 SUPERFAMILY--SSF52047 no 0.65
16 mRNA_8319 16687 HMMPfam-Protein of unknown function (DUF2370)-PF10176 no 0.65
17 mRNA_3309 11677 HMMPfam-Amidohydrolase family-PF01979,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556 no 0.64
18 mRNA_5771 14139 K00921 PIKFYVE, FAB1 1-phosphatidylinositol-3-phosphate 5-kinase no 0.64
19 mRNA_3100 11468 Hypothetical Protein no 0.64
20 mRNA_7355 15723 HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232 no 0.63