Top cofit genes for mRNA_3140 from Rhodosporidium toruloides IFO0880

mRNA_3140 11508 : BLAST peptide release factor [Melanopsichium pennsylvanicum 4]

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_1969 10337 K14961 RBBP5, SWD1, CPS50 COMPASS component SWD1 no 0.88
2 mRNA_6866 15234 Hypothetical Protein no 0.83
3 mRNA_8014 16382 HMMPfam-Protein of unknown function (DUF1769)-PF08588 no 0.80
4 mRNA_4566 12934 KOG2273 Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins no 0.79
5 mRNA_5231 13599 Hypothetical Protein no 0.79
6 mRNA_122 8490 HMMPfam-Rare lipoprotein A (RlpA)-like double-psi beta-barrel-PF03330,SUPERFAMILY--SSF50685 no 0.78
7 mRNA_4713 13081 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.77
8 mRNA_5544 13912 Hypothetical Protein no 0.76
9 mRNA_5616 13984 HMMPfam-GRF zinc finger-PF06839 no 0.76
10 mRNA_3107 11475 K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2 no 0.76
11 mRNA_8246 16614 Hypothetical Protein no 0.75
12 mRNA_7634 16002 HMMPfam-Protein of unknown function (DUF1264)-PF06884 no 0.75
13 mRNA_6221 14589 HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,SMART-Broad-Complex, Tramtrack and Bric a brac-SM00225,SUPERFAMILY--SSF54695 no 0.74
14 mRNA_3761 12129 K20520 DBNL, ABP1 drebrin-like protein no 0.74
15 mRNA_4499 12867 K01968 E6.4.1.4A 3-methylcrotonyl-CoA carboxylase alpha subunit no 0.74
16 mRNA_288 8656 K00521 E1.16.1.7 ferric-chelate reductase no 0.74
17 mRNA_3368 11736 Hypothetical Protein no 0.74
18 mRNA_6626 14994 Hypothetical Protein no 0.73
19 mRNA_5789 14157 KOG2859 DNA repair protein, member of the recA/RAD51 family no 0.73
20 mRNA_7771 16139 HMMPfam-SPFH domain / Band 7 family-PF01145,PRINTS-Stomatin signature-PR00721,SMART-prohibitin homologues-SM00244,SUPERFAMILY--SSF117892 no 0.73