Top cofit genes for mRNA_3085 from Rhodosporidium toruloides IFO0880

mRNA_3085 11453 : K06269 PPP1C serine/threonine-protein phosphatase PP1 catalytic subunit

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5824 14192 Hypothetical Protein no 0.87
2 mRNA_3984 12352 Hypothetical Protein no 0.87
3 mRNA_6394 14762 HMMPfam-Asparagine synthase-PF00733,SUPERFAMILY--SSF52402,SUPERFAMILY--SSF56235 no 0.85
4 mRNA_2307 10675 HMMPfam-Mitochondrial ATPase inhibitor, IATP-PF04568,SUPERFAMILY--SSF64602 no 0.74
5 mRNA_1382 9750 K11805 WDR68, HAN11 WD repeat-containing protein 68 no 0.74
6 mRNA_6703 15071 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.73
7 mRNA_2913 11281 K13703 ABHD11 abhydrolase domain-containing protein 11 no 0.72
8 mRNA_4956 13324 HMMPfam-SMI1 / KNR4 family (SUKH-1)-PF09346 no 0.71
9 mRNA_5732 14100 HMMPfam-bZIP transcription factor-PF00170,HMMPfam-Minimal binding motif of Hap4 for binding to Hap2/3/5-PF10297,ProSitePatterns-Basic-leucine zipper (bZIP) domain signature.-PS00036,SUPERFAMILY--SSF57959 no 0.70
10 mRNA_4627 12995 K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4 no 0.69
11 mRNA_5552 13920 K03360 GRR1 F-box and leucine-rich repeat protein GRR1 no 0.69
12 mRNA_6307 14675 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
13 mRNA_7309 15677 KOG0803 Predicted E3 ubiquitin ligase no 0.67
14 mRNA_6678 15046 KOG2533 Permease of the major facilitator superfamily no 0.66
15 mRNA_3523 11891 K08064 NFYA nuclear transcription factor Y, alpha no 0.65
16 mRNA_1642 10010 K03937 NDUFS4 NADH dehydrogenase (ubiquinone) Fe-S protein 4 no 0.64
17 mRNA_5084 13452 Hypothetical Protein no 0.63
18 mRNA_8092 16460 K14457 MOGAT2, MGAT2 2-acylglycerol O-acyltransferase 2 no 0.63
19 mRNA_1250 9618 Hypothetical Protein no 0.62
20 mRNA_6680 15048 K11430 EZH2 histone-lysine N-methyltransferase EZH2 no 0.62