Top cofit genes for mRNA_3079 from Rhodosporidium toruloides IFO0880

mRNA_3079 11447 : HMMPfam-DNA polymerase Ligase (LigD)-PF13298

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5557 13925 K09008 NDUFAF3 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 no 0.84
2 mRNA_2239 10607 K18163 NDUFAF6 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6 no 0.83
3 mRNA_2365 10733 HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562 no 0.82
4 mRNA_305 8673 HMMPfam-Peroxisomal biogenesis factor 11 (PEX11)-PF05648 no 0.81
5 mRNA_6843 15211 BLAST protein of unknown function [Taphrina deformans PYCC ... no 0.81
6 mRNA_5679 14047 KOG1944 Peroxisomal membrane protein MPV17 and related proteins no 0.79
7 mRNA_6749 15117 Hypothetical Protein no 0.79
8 mRNA_4175 12543 K03939 NDUFS6 NADH dehydrogenase (ubiquinone) Fe-S protein 6 no 0.79
9 mRNA_3419 11787 K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase no 0.79
10 mRNA_7390 15758 HMMPfam-Ubiquinol-cytochrome C reductase hinge protein-PF02320,SUPERFAMILY--SSF81531 no 0.77
11 mRNA_4125 12493 KOG0627 Heat shock transcription factor no 0.76
12 mRNA_144 8512 K00698 CHS1 chitin synthase no 0.76
13 mRNA_4587 12955 HMMPfam-Complex1_LYR-like-PF13232 no 0.75
14 mRNA_2835 11203 K00022 HADH 3-hydroxyacyl-CoA dehydrogenase no 0.74
15 mRNA_3463 11831 Hypothetical Protein no 0.74
16 mRNA_4138 12506 HMMPfam-Cytochrome c oxidase subunit VIIa-PF02238 no 0.74
17 mRNA_7007 15375 BLAST mitochondrial complex I protein Fmp36 [Aschersonia al... no 0.73
18 mRNA_5043 13411 PIRSF--PIRSF022976 no 0.73
19 mRNA_707 9075 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.72
20 mRNA_4627 12995 K16196 EIF2AK4 eukaryotic translation initiation factor 2-alpha kinase 4 no 0.72