Top cofit genes for mRNA_3066 from Rhodosporidium toruloides IFO0880

mRNA_3066 11434 : K13449 PR1 pathogenesis-related protein 1

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2397 10765 Hypothetical Protein no 0.83
2 mRNA_2683 11051 K07300 chaA, CAX Ca2+-H+ antiporter no 0.79
3 mRNA_4925 13293 ProSiteProfiles-WW/rsp5/WWP domain profile.-PS50020,SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 no 0.77
4 mRNA_5322 13690 K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase no 0.76
5 mRNA_5166 13534 KOG0590 Checkpoint kinase and related serine/threonine protein kinases no 0.75
6 mRNA_4671 13039 Hypothetical Protein no 0.75
7 mRNA_4299 12667 K12617 PATL1, PAT1 DNA topoisomerase 2-associated protein PAT1 no 0.74
8 mRNA_2170 10538 K20294 COG7 conserved oligomeric Golgi complex subunit 7 no 0.73
9 mRNA_6951 15319 ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065 no 0.72
10 mRNA_3504 11872 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.72
11 mRNA_1739 10107 Hypothetical Protein no 0.71
12 mRNA_1640 10008 KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) no 0.71
13 mRNA_6234 14602 K00318 PRODH proline dehydrogenase no 0.71
14 mRNA_75 8443 K00606 panB 3-methyl-2-oxobutanoate hydroxymethyltransferase no 0.70
15 mRNA_2438 10806 HMMPfam-Predicted coiled-coil protein (DUF2205)-PF10224 no 0.70
16 mRNA_6657 15025 K16302 CNNM metal transporter CNNM no 0.70
17 mRNA_7130 15498 KOG3077 Uncharacterized conserved protein no 0.69
18 mRNA_3091 11459 K13303 SGK2 serum/glucocorticoid-regulated kinase 2 no 0.69
19 mRNA_1569 9937 KOG3114 Uncharacterized conserved protein no 0.69
20 mRNA_2523 10891 Hypothetical Protein no 0.68