Top cofit genes for mRNA_2820 from Rhodosporidium toruloides IFO0880

mRNA_2820 11188 : HMMPfam-2-oxoacid dehydrogenases acyltransferase (catalytic domain)-PF00198,HMMPfam-Biotin-requiring enzyme-PF00364,HMMPfam-e3 binding domain-PF02817,SUPERFAMILY--SSF47005,SUPERFAMILY--SSF51230,SUPERFAMILY--SSF52777

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6706 15074 K16261 YAT yeast amino acid transporter no 0.85
2 mRNA_4245 12613 Hypothetical Protein no 0.82
3 mRNA_5647 14015 KOG4719 Nuclear pore complex protein no 0.82
4 mRNA_4023 12391 K01061 E3.1.1.45 carboxymethylenebutenolidase no 0.81
5 mRNA_2082 10450 Hypothetical Protein no 0.78
6 mRNA_4171 12539 KOG2806 Chitinase no 0.77
7 mRNA_4235 12603 ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112 no 0.76
8 mRNA_3981 12349 K10660 MARCH5 E3 ubiquitin-protein ligase MARCH5 no 0.75
9 mRNA_1817 10185 HMMPfam-Ring finger domain-PF13639,ProSitePatterns-EGF-like domain signature 1.-PS00022,ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger SWIM-type profile.-PS50966,SUPERFAMILY--SSF57850 no 0.75
10 mRNA_2366 10734 HMMPfam-GDP/GTP exchange factor Sec2p-PF06428,SUPERFAMILY--SSF144284 no 0.75
11 mRNA_2484 10852 K11498 CENPE centromeric protein E no 0.74
12 mRNA_8420 16788 SUPERFAMILY--SSF52047 no 0.74
13 mRNA_2117 10485 Hypothetical Protein no 0.74
14 mRNA_224 8592 K07300 chaA, CAX Ca2+-H+ antiporter no 0.72
15 mRNA_1338 9706 SUPERFAMILY--SSF52047 no 0.72
16 mRNA_6212 14580 SMART-Domain with 2 conserved Trp (W) residues-SM00456,SUPERFAMILY--SSF51045 no 0.72
17 mRNA_6061 14429 KOG3772 M-phase inducer phosphatase no 0.71
18 mRNA_5498 13866 Hypothetical Protein no 0.71
19 mRNA_7326 15694 K01969 E6.4.1.4B 3-methylcrotonyl-CoA carboxylase beta subunit no 0.71
20 mRNA_6053 14421 Hypothetical Protein no 0.71