Top cofit genes for mRNA_2816 from Rhodosporidium toruloides IFO0880

mRNA_2816 11184 : HMMPfam-linker histone H1 and H5 family-PF00538,ProSiteProfiles-Linker histone H1/H5 globular (H15) domain profile.-PS51504,SMART-Domain in histone families 1 and 5-SM00526,SUPERFAMILY--SSF46785

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_5961 14329 HMMPfam-F-box-like-PF12937 no 0.77
2 mRNA_1751 10119 KOG2726 Mitochondrial polypeptide chain release factor no 0.74
3 mRNA_5414 13782 HMMPfam-Glycosyl transferase family 2-PF13704 no 0.73
4 mRNA_4279 12647 KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) no 0.70
5 mRNA_5281 13649 KOG0085 G protein subunit Galphaq/Galphay, small G protein superfamily no 0.70
6 mRNA_3136 11504 KOG2615 Permease of the major facilitator superfamily no 0.70
7 mRNA_2503 10871 SUPERFAMILY--SSF63829 no 0.69
8 mRNA_7328 15696 KOG1339 Aspartyl protease no 0.68
9 mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.68
10 mRNA_2036 10404 HMMPfam-Alpha and gamma adaptin binding protein p34-PF10199 no 0.68
11 mRNA_1862 10230 Interpro DNA replication factor Cdt1 C-terminal domain 0 no 0.68
12 mRNA_5192 13560 KOG2814 Transcription coactivator complex, P50 component (LigT RNA ligase/phosphodiesterase family) no 0.66
13 mRNA_438 8806 Hypothetical Protein no 0.65
14 mRNA_2065 10433 Hypothetical Protein no 0.65
15 mRNA_4044 12412 Hypothetical Protein no 0.65
16 mRNA_22 8390 SUPERFAMILY--SSF51045 no 0.64
17 mRNA_3728 12096 K11142 LAP3 cytosol aminopeptidase no 0.64
18 mRNA_3665 12033 HMMPfam-CorA-like Mg2+ transporter protein-PF01544,SUPERFAMILY--SSF143865,SUPERFAMILY--SSF144083 no 0.64
19 mRNA_1758 10126 KOG2998 Uncharacterized conserved protein no 0.64
20 mRNA_7950 16318 K04802 PCNA proliferating cell nuclear antigen no 0.63