Top cofit genes for mRNA_2650 from Rhodosporidium toruloides IFO0880

mRNA_2650 11018 : BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa]

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.79
2 mRNA_2422 10790 KOG2342 Uncharacterized conserved protein no 0.78
3 mRNA_5970 14338 Hypothetical Protein no 0.77
4 mRNA_6376 14744 K14811 DBP3 ATP-dependent RNA helicase DBP3 no 0.77
5 mRNA_4608 12976 KOG0254 Predicted transporter (major facilitator superfamily) no 0.74
6 mRNA_230 8598 K11254 H4 histone H4 no 0.74
7 mRNA_6311 14679 K03514 PAPD5_7, TRF4 non-canonical poly(A) RNA polymerase PAPD5/7 no 0.73
8 mRNA_2569 10937 K07250 gabT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase no 0.73
9 mRNA_3423 11791 KOG3655 Drebrins and related actin binding proteins no 0.73
10 mRNA_733 9101 K13954 yiaY alcohol dehydrogenase no 0.73
11 mRNA_5462 13830 HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321 no 0.72
12 mRNA_5944 14312 Hypothetical Protein no 0.72
13 mRNA_6064 14432 Hypothetical Protein no 0.72
14 mRNA_6380 14748 HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383 no 0.72
15 mRNA_4877 13245 KOG2533 Permease of the major facilitator superfamily no 0.70
16 mRNA_3619 11987 HMMPfam-X-Pro dipeptidyl-peptidase (S15 family)-PF02129,HMMPfam-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-PF08530,SMART-X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain-SM00939,SUPERFAMILY--SSF49785,SUPERFAMILY--SSF53474,TIGRFAM-/NonD hydrolase CocE/NonD family protein-TIGR00976 no 0.70
17 mRNA_5573 13941 BLAST Protein priA [Hypsizygus marmoreus] no 0.69
18 mRNA_7190 15558 Hypothetical Protein no 0.69
19 mRNA_6217 14585 K17362 ACOT13 acyl-coenzyme A thioesterase 13 no 0.69
20 mRNA_1379 9747 HMMPfam-Ubiquitin-2 like Rad60 SUMO-like-PF11976,SUPERFAMILY--SSF54236 no 0.68