Top cofit genes for mRNA_2648 from Rhodosporidium toruloides IFO0880

mRNA_2648 11016 : SUPERFAMILY--SSF52058

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_9 8377 Hypothetical Protein no 0.75
2 mRNA_6951 15319 ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065 no 0.72
3 mRNA_3828 12196 Hypothetical Protein no 0.72
4 mRNA_4701 13069 HMMPfam-Asp/Glu/Hydantoin racemase-PF01177 no 0.70
5 mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 no 0.68
6 mRNA_545 8913 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.67
7 mRNA_1251 9619 HMMPfam-Protein of unknown function (DUF2611)-PF11022 no 0.65
8 mRNA_3930 12298 Hypothetical Protein no 0.65
9 mRNA_513 8881 K09468 MSN2_4 zinc finger protein MSN2/4 no 0.65
10 mRNA_5012 13380 K01886 QARS, glnS glutaminyl-tRNA synthetase no 0.64
11 mRNA_850 9218 SUPERFAMILY--SSF52047 no 0.63
12 mRNA_2523 10891 Hypothetical Protein no 0.63
13 mRNA_8 8376 K01194 TREH, treA, treF alpha,alpha-trehalase no 0.63
14 mRNA_7303 15671 KOG1269 SAM-dependent methyltransferases no 0.63
15 mRNA_38 8406 HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097 no 0.63
16 mRNA_5082 13450 K10696 BRE1 E3 ubiquitin-protein ligase BRE1 no 0.63
17 mRNA_7586 15954 HMMPfam-Cytochrome oxidase c assembly-PF14880 no 0.62
18 mRNA_8173 16541 HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316 no 0.62
19 mRNA_7941 16309 Hypothetical Protein no 0.61
20 mRNA_5401 13769 HMMPfam-Complex 1 protein (LYR family)-PF05347 no 0.61