Top cofit genes for mRNA_2646 from Rhodosporidium toruloides IFO0880

mRNA_2646 11014 : HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF52058

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3632 12000 HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112 no 0.89
2 mRNA_2515 10883 KOG0035 Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) no 0.88
3 mRNA_1822 10190 KOG0627 Heat shock transcription factor no 0.81
4 mRNA_7912 16280 K11434 PRMT1 type I protein arginine methyltransferase no 0.81
5 mRNA_1109 9477 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701 no 0.79
6 mRNA_68 8436 K12599 SKI2, SKIV2L antiviral helicase SKI2 no 0.79
7 mRNA_5737 14105 HMMPfam-Arsenite-resistance protein 2-PF04959,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157 no 0.79
8 mRNA_5667 14035 K11233 SSK1 osomolarity two-component system, response regulator SSK1 no 0.79
9 mRNA_4889 13257 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.79
10 mRNA_3423 11791 KOG3655 Drebrins and related actin binding proteins no 0.78
11 mRNA_3886 12254 K14298 RAE1, GLE2 mRNA export factor no 0.77
12 mRNA_4422 12790 BLAST Regulator of nonsense transcripts UPF2 [Grifola frond... no 0.77
13 mRNA_5053 13421 Hypothetical Protein no 0.77
14 mRNA_165 8533 K12602 WDR61, REC14, SKI8 WD repeat-containing protein 61 no 0.77
15 mRNA_5856 14224 K03357 APC10, DOC1 anaphase-promoting complex subunit 10 no 0.76
16 mRNA_225 8593 KOG0619 FOG Leucine rich repeat no 0.76
17 mRNA_3914 12282 HMMPfam-Domain of unknown function (DUF1708)-PF08101,ProSiteProfiles-Rho GTPase-activating proteins domain profile.-PS50238,SMART-GTPase-activator protein for Rho-like GTPases-SM00324,SUPERFAMILY--SSF48350 no 0.76
18 mRNA_5546 13914 Hypothetical Protein no 0.75
19 mRNA_2302 10670 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.74
20 mRNA_1127 9495 K00143 LYS2 L-aminoadipate-semialdehyde dehydrogenase no 0.74