Top cofit genes for mRNA_2569 from Rhodosporidium toruloides IFO0880

mRNA_2569 10937 : K07250 gabT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_3423 11791 KOG3655 Drebrins and related actin binding proteins no 0.84
2 mRNA_2192 10560 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.81
3 mRNA_6019 14387 Hypothetical Protein no 0.81
4 mRNA_6376 14744 K14811 DBP3 ATP-dependent RNA helicase DBP3 no 0.80
5 mRNA_733 9101 K13954 yiaY alcohol dehydrogenase no 0.78
6 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.77
7 mRNA_8135 16503 K00804 GGPS1 geranylgeranyl diphosphate synthase, type III no 0.77
8 mRNA_1204 9572 K11253 H3 histone H3 no 0.77
9 mRNA_5442 13810 HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708 no 0.75
10 mRNA_5770 14138 K15171 SUPT4H1, SPT4 transcription elongation factor SPT4 no 0.74
11 mRNA_2990 11358 SUPERFAMILY--SSF52047 no 0.74
12 mRNA_2650 11018 BLAST Plasma membrane fusion protein PRM1 [Grifola frondosa] no 0.73
13 mRNA_4889 13257 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.73
14 mRNA_6257 14625 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701 no 0.72
15 mRNA_5931 14299 SUPERFAMILY--SSF51695 no 0.72
16 mRNA_7701 16069 SMART-Armadillo/beta-catenin-like repeats-SM00185,SUPERFAMILY--SSF48371 no 0.72
17 mRNA_5258 13626 KOG0538 Glycolate oxidase no 0.72
18 mRNA_3627 11995 SUPERFAMILY--SSF51110,SUPERFAMILY--SSF51126 no 0.72
19 mRNA_8480 16848 KOG2174 Leptin receptor gene-related protein no 0.72
20 mRNA_4110 12478 BLAST metal resistance protein ycf1 [Trichosporon asahii va... no 0.71