Top cofit genes for mRNA_2536 from Rhodosporidium toruloides IFO0880

mRNA_2536 10904 : K15601 KDM3 lysine-specific demethylase 3

 

Rank Hit Name Description Conserved? Cofitness  
1 mRNA_6019 14387 Hypothetical Protein no 0.83
2 mRNA_2418 10786 HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445 no 0.81
3 mRNA_963 9331 K15109 SLC25A20_29, CACT, CACL, CRC1 solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29 no 0.81
4 mRNA_3284 11652 BLAST something about silencing, SAS, complex subunit 4 [Rh... no 0.80
5 mRNA_1300 9668 BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy... no 0.80
6 mRNA_296 8664 K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3 no 0.79
7 mRNA_5442 13810 HMMPfam-R3H domain-PF01424,HMMPfam-SUZ domain-PF12752,ProSiteProfiles-R3H domain profile.-PS51061,ProSiteProfiles-SUZ domain profile.-PS51673,SUPERFAMILY--SSF82708 no 0.79
8 mRNA_8077 16445 HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701 no 0.79
9 mRNA_2804 11172 K10808 RRM2 ribonucleoside-diphosphate reductase subunit M2 no 0.79
10 mRNA_6649 15017 K12580 CNOT3, NOT3 CCR4-NOT transcription complex subunit 3 no 0.78
11 mRNA_4422 12790 BLAST Regulator of nonsense transcripts UPF2 [Grifola frond... no 0.78
12 mRNA_8403 16771 K08829 MAK male germ cell-associated kinase no 0.78
13 mRNA_6259 14627 HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713 no 0.78
14 mRNA_786 9154 Hypothetical Protein no 0.77
15 mRNA_7147 15515 Hypothetical Protein no 0.77
16 mRNA_1910 10278 HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355 no 0.77
17 mRNA_784 9152 HMMPfam-Uncharacterized alpha/beta hydrolase domain (DUF2235)-PF09994 no 0.76
18 mRNA_4387 12755 HMMPfam-Ctf8-PF09696 no 0.76
19 mRNA_1245 9613 HMMPfam-Magnesium transporter NIPA-PF05653,SUPERFAMILY--SSF103481 no 0.76
20 mRNA_4282 12650 Hypothetical Protein no 0.75